RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 FAM169BQ8N8A8 192 aa6.89□□□□□ -1.31
HDAC3-209ENST00000486618 ATP11CQ8NB49 1132 aa6.89□□□□□ -1.31
HDAC3-209ENST00000486618 KDM1BQ8NB78 822 aa6.89□□□□□ -1.31
HDAC3-209ENST00000486618 CCDC150Q8NCX0 1101 aa6.89□□□□□ -1.31
HDAC3-209ENST00000486618 BBOF1Q8ND07 529 aa6.89□□□□□ -1.31
HDAC3-209ENST00000486618 PLEKHO2Q8TD55 490 aa6.89□□□□□ -1.31
HDAC3-209ENST00000486618 ELMO3Q96BJ8 720 aa6.89□□□□□ -1.31
HDAC3-209ENST00000486618 UQCC2Q9BRT2 126 aa6.89□□□□□ -1.31
HDAC3-209ENST00000486618 EBF2Q9HAK2 575 aa6.89□□□□□ -1.31
HDAC3-209ENST00000486618 CPNE5Q9HCH3 593 aa6.89□□□□□ -1.31
HDAC3-209ENST00000486618 THSD1Q9NS62 852 aa6.89□□□□□ -1.31
HDAC3-209ENST00000486618 DDX18Q9NVP1 670 aaKnown RBP6.89□□□□□ -1.31
HDAC3-209ENST00000486618 IL1RAPL1Q9NZN1 696 aa6.89□□□□□ -1.31
HDAC3-209ENST00000486618 EXTL2Q9UBQ6 330 aa6.89□□□□□ -1.31
HDAC3-209ENST00000486618 STOML2Q9UJZ1 356 aa6.89□□□□□ -1.31
HDAC3-209ENST00000486618 PPT2Q9UMR5 302 aa6.89□□□□□ -1.31
HDAC3-209ENST00000486618 EDARQ9UNE0 448 aa6.89□□□□□ -1.31
HDAC3-209ENST00000486618 HEMK1Q9Y5R4 338 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-209ENST00000486618 DOCK9Q9BZ29 2069 aa6.89□□□□□ -1.31
HDAC3-209ENST00000486618 TBC1D3DA0A087WVF3 549 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 TBC1D3IA0A087WXS9 549 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 TBC1D3EA0A087X179 549 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 TBC1D3KA0A087X1G2 549 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 TYW5A2RUC4 315 aaKnown RBP6.88□□□□□ -1.31
HDAC3-209ENST00000486618 TBC1D3FA6NER0 549 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-209ENST00000486618 TBC1D3LB9A6J9 549 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 F5H0A9 414 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-209ENST00000486618 PLD2O14939 933 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 MID1O15344 667 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 IRAK2O43187 625 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 SIGLEC6O43699 453 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 SOCS5O75159 536 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 USP12O75317 370 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 MOCS3O95396 460 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 GJB6O95452 261 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 ADCY5O95622 1261 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 ZBED1O96006 694 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 HLA-DRAP01903 254 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 LTFP02788 710 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 MPOP05164 745 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 TBC1D3HP0C7X1 549 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 TMEM11P17152 192 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 C5AR1P21730 350 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 RECQLP46063 649 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-209ENST00000486618 DRG2P55039 364 aaKnown RBP6.88□□□□□ -1.31
HDAC3-209ENST00000486618 DCAF7P61962 342 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 TMPRSS15P98073 1019 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 RUNX1T1Q06455 604 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 KCNJ12Q14500 433 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 ODF1Q14990 250 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 SLC39A14Q15043 492 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 CCDC38Q502W7 563 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 TBC1D3GQ6DHY5 549 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 TBC1D3CQ6IPX1 549 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 SPOPLQ6IQ16 392 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 PPP1R21Q6ZMI0 780 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 KANSL1Q7Z3B3 1105 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 NUP54Q7Z3B4 507 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 PIGZQ86VD9 579 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 MMAAQ8IVH4 418 aaKnown RBP6.88□□□□□ -1.31
HDAC3-209ENST00000486618 TBC1D3Q8IZP1 549 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-209ENST00000486618 ESX1Q8N693 406 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 ANKRD53Q8N9V6 530 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 IQUBQ8NA54 791 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 DENND6BQ8NEG7 585 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 OR14C36Q8NHC7 312 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 GPBAR1Q8TDU6 330 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 HEXIM2Q96MH2 286 aaKnown RBP6.88□□□□□ -1.31
HDAC3-209ENST00000486618 TWNKQ96RR1 684 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 DDX50Q9BQ39 737 aaKnown RBP6.88□□□□□ -1.31
HDAC3-209ENST00000486618 KRTAP4-12Q9BQ66 201 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 SEMA4CQ9C0C4 833 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 NSRP1Q9H0G5 558 aaKnown RBP6.88□□□□□ -1.31
HDAC3-209ENST00000486618 TRIT1Q9H3H1 467 aaKnown RBP6.88□□□□□ -1.31
HDAC3-209ENST00000486618 POLR1BQ9H9Y6 1135 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 INTS7Q9NVH2 962 aaKnown RBP6.88□□□□□ -1.31
HDAC3-209ENST00000486618 IL17BQ9UHF5 180 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 ADGRE2Q9UHX3 823 aa6.88□□□□□ -1.31
HDAC3-209ENST00000486618 A0A087X0M5 115 aa6.87□□□□□ -1.31
HDAC3-209ENST00000486618 EDDM13A0A1B0GTR0 161 aa6.87□□□□□ -1.31
HDAC3-209ENST00000486618 PVALEFA0A1B0GWK0 134 aa6.87□□□□□ -1.31
HDAC3-209ENST00000486618 A0A1B0GX30 115 aa6.87□□□□□ -1.31
HDAC3-209ENST00000486618 LRRC14BA6NHZ5 514 aa6.87□□□□□ -1.31
HDAC3-209ENST00000486618 PYCARD-AS1I3L0S3 204 aa6.87□□□□□ -1.31
HDAC3-209ENST00000486618 K7ENP7 123 aa6.87□□□□□ -1.31
HDAC3-209ENST00000486618 EIF3FO00303 357 aaPredicted RBP6.87□□□□□ -1.31
HDAC3-209ENST00000486618 EBAG9O00559 213 aa6.87□□□□□ -1.31
HDAC3-209ENST00000486618 WNT9AO14904 365 aa6.87□□□□□ -1.31
HDAC3-209ENST00000486618 RIPK2O43353 540 aa6.87□□□□□ -1.31
HDAC3-209ENST00000486618 LATO43561 262 aa6.87□□□□□ -1.31
HDAC3-209ENST00000486618 OPA1O60313 960 aa6.87□□□□□ -1.31
HDAC3-209ENST00000486618 TBL1XO60907 577 aa6.87□□□□□ -1.31
HDAC3-209ENST00000486618 FBXO24O75426 580 aa6.87□□□□□ -1.31
HDAC3-209ENST00000486618 NTRK1P04629 796 aa6.87□□□□□ -1.31
HDAC3-209ENST00000486618 GP1BAP07359 652 aa6.87□□□□□ -1.31
HDAC3-209ENST00000486618 SRPRAP08240 638 aaKnown RBP6.87□□□□□ -1.31
HDAC3-209ENST00000486618 VIMP08670 466 aaKnown RBP6.87□□□□□ -1.31
HDAC3-209ENST00000486618 TPM1P09493 284 aa6.87□□□□□ -1.31
HDAC3-209ENST00000486618 FAM87AP0C7U9 286 aa6.87□□□□□ -1.31
HDAC3-209ENST00000486618 ALPPL2P10696 532 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 390.2 ms