RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 KIFC1Q9BW19 673 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 TSSK1BQ9BXA7 367 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 FAM126AQ9BYI3 521 aaPredicted RBP6.94□□□□□ -1.3
UBR4-214ENST00000486515 TPSD1Q9BZJ3 242 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 ZCCHC2Q9C0B9 1178 aaKnown RBP6.94□□□□□ -1.3
UBR4-214ENST00000486515 FAM83DQ9H4H8 585 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 PPCSQ9HAB8 311 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 BPIFA1Q9NP55 256 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 NLE1Q9NVX2 485 aaPredicted RBP6.94□□□□□ -1.3
UBR4-214ENST00000486515 EBF1Q9UH73 591 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 CRLS1Q9UJA2 301 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 HCN2Q9UL51 889 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 RIMKLBQ9ULI2 386 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 CYP8B1Q9UNU6 501 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 FADS3Q9Y5Q0 445 aa6.94□□□□□ -1.3
UBR4-214ENST00000486515 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.94□□□□□ -1.3
UBR4-214ENST00000486515 TICRRQ7Z2Z1 1910 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 DOCK4Q8N1I0 1966 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 SHROOM3Q8TF72 1996 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 MYOFQ9NZM1 2061 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 KIAA1549LQ6ZVL6 1849 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 CCDC163A0A0D9SF12 145 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 EXOC1LA0A1B0GW35 172 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 A0A1W2PQU0 124 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 PLK4O00444 970 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 DYNC1I1O14576 645 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 FPGTO14772 594 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 BUD23O43709 281 aaKnown RBP6.93□□□□□ -1.3
UBR4-214ENST00000486515 MMP20O60882 483 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 RECQL5O94762 991 aaPredicted RBP6.93□□□□□ -1.3
UBR4-214ENST00000486515 FSBPO95073 299 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 VAPBO95292 243 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 PRAMEF1O95521 474 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 C6P13671 934 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 MSH3P20585 1137 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 KELP23276 732 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 HTR1BP28222 390 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 ATP5DP30049 168 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 AKT1P31749 480 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 MC4RP32245 332 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 DRD3P35462 400 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 MMP12P39900 470 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 MSH2P43246 934 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 MAGEA3P43357 314 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 GPR1P46091 355 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 SPINT3P49223 89 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 TTPAP49638 278 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 ADPRHP54922 357 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 RPL6Q02878 288 aaKnown RBP6.93□□□□□ -1.3
UBR4-214ENST00000486515 PTSQ03393 145 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 CACNG1Q06432 222 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 SRSF1Q07955 248 aaKnown RBP eCLIP6.93□□□□□ -1.3
UBR4-214ENST00000486515 MGAT5Q09328 741 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 NAB1Q13506 487 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 STAT4Q14765 748 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 NAA30Q147X3 362 aaPredicted RBP6.93□□□□□ -1.3
UBR4-214ENST00000486515 CRYMQ14894 314 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 LRRC14Q15048 493 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 UAP1Q16222 522 aaPredicted RBP6.93□□□□□ -1.3
UBR4-214ENST00000486515 MAP7D1Q3KQU3 841 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 GPR33Q49SQ1 333 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 WDR45BQ5MNZ6 344 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 PIP5KL1Q5T9C9 394 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 AGBL4Q5VU57 503 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 ALS2CLQ60I27 953 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 RAET1GQ6H3X3 334 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 KIAA0930Q6ICG6 404 aaPredicted RBP6.93□□□□□ -1.3
UBR4-214ENST00000486515 DENND5AQ6IQ26 1287 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 ZNF449Q6P9G9 518 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 LIPIQ6XZB0 460 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 CERS6Q6ZMG9 384 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 CEP68Q76N32 757 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 LPCAT2Q7L5N7 544 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 PTAR1Q7Z6K3 402 aaPredicted RBP6.93□□□□□ -1.3
UBR4-214ENST00000486515 TMEM135Q86UB9 458 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 LONP2Q86WA8 852 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 HORMAD1Q86X24 394 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 ZSWIM9Q86XI8 627 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 PHYKPLQ8IUZ5 450 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 RGL4Q8IZJ4 473 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 CBARPQ8N350 705 aaPredicted RBP6.93□□□□□ -1.3
UBR4-214ENST00000486515 OR13C4Q8NGS5 318 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 HDAC10Q969S8 669 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 AP2M1Q96CW1 435 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 MFSD3Q96ES6 412 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 CERS2Q96G23 380 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 TOE1Q96GM8 510 aaKnown RBP6.93□□□□□ -1.3
UBR4-214ENST00000486515 SIGLEC10Q96LC7 697 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 GPR174Q9BXC1 333 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 STMN4Q9H169 189 aaPredicted RBP6.93□□□□□ -1.3
UBR4-214ENST00000486515 PCED1AQ9H1Q7 454 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 SLC6A17Q9H1V8 727 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 CDC42EP4Q9H3Q1 356 aaKnown RBP6.93□□□□□ -1.3
UBR4-214ENST00000486515 ASB8Q9H765 288 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 CATSPERZQ9NTU4 200 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 POLR3BQ9NW08 1133 aaPredicted RBP6.93□□□□□ -1.3
UBR4-214ENST00000486515 USP36Q9P275 1121 aaKnown RBP6.93□□□□□ -1.3
UBR4-214ENST00000486515 FBXO4Q9UKT5 387 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 RAB23Q9ULC3 237 aa6.93□□□□□ -1.3
UBR4-214ENST00000486515 SMG5Q9UPR3 1016 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms