RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 DLG2Q15700 870 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 MSS51Q4VC12 460 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 MTSS1LQ765P7 747 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 HPS6Q86YV9 775 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 SELENOMQ8WWX9 145 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 NSMCE2Q96MF7 247 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 NPY6RQ99463 290 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 COPS8Q99627 209 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 CDH19Q9H159 772 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 CAPN10Q9HC96 672 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 GKN1Q9NS71 199 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 SLC17A6Q9P2U8 582 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 MFHAS1Q9Y4C4 1052 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 LTBP4Q8N2S1 1624 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11□□□□□ -0.65
HDAC6-228ENST00000486227 HGFP14210 728 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 ATP6V1B2P21281 511 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 GPR15P49685 360 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 CDH4P55283 916 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 ATP6V0D1P61421 351 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 MAD2L1Q13257 205 aaPredicted RBP11□□□□□ -0.65
HDAC6-228ENST00000486227 FBXO46Q6PJ61 603 aaPredicted RBP11□□□□□ -0.65
HDAC6-228ENST00000486227 CNSTQ6PJW8 725 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 PQLC3Q8N755 202 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 C2orf15Q8WU43 125 aaKnown RBP11□□□□□ -0.65
HDAC6-228ENST00000486227 PTCD2Q8WV60 388 aaKnown RBP11□□□□□ -0.65
HDAC6-228ENST00000486227 TMEM40Q8WWA1 233 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 PLEKHG4BQ96PX9 1271 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 ABCG8Q9H221 673 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 PREBQ9HCU5 417 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 SLC7A8Q9UHI5 535 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 MYO9BQ13459 2157 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 MATN2O00339 956 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 RGS14O43566 566 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 ZNF865P0CJ78 1059 aaPredicted RBP11□□□□□ -0.65
HDAC6-228ENST00000486227 COL6A1P12109 1028 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 MAPKAPK2P49137 400 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 AGMOQ6ZNB7 445 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 ASRGL1Q7L266 308 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 ADAMTSL2Q86TH1 951 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 FIG4Q92562 907 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 DNAJC1Q96KC8 554 aaKnown RBP11□□□□□ -0.65
HDAC6-228ENST00000486227 NLNQ9BYT8 704 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 EIF2B3Q9NR50 452 aaKnown RBP11□□□□□ -0.65
HDAC6-228ENST00000486227 RGS17Q9UGC6 210 aaPredicted RBP11□□□□□ -0.65
HDAC6-228ENST00000486227 GNEQ9Y223 722 aaKnown RBP11□□□□□ -0.65
HDAC6-228ENST00000486227 NWD2Q9ULI1 1742 aa11□□□□□ -0.65
HDAC6-228ENST00000486227 GPR32O75388 356 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 LDLRP01130 860 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 UGT2B4P06133 528 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 PIK3CGP48736 1102 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 RAB15P59190 212 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 IL10RBQ08334 325 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 DPYSQ14117 519 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 CCDC142Q17RM4 750 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 RAET1GQ6H3X3 334 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 ZFYVE1Q9HBF4 777 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 AHSPQ9NZD4 102 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 HECAQ9UBI9 543 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-228ENST00000486227 ZNHIT2Q9UHR6 403 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 TLR6Q9Y2C9 796 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 MYADML2A6NDP7 307 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 PRMT5O14744 637 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-228ENST00000486227 GRM6O15303 877 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 PKMP14618 531 aaKnown RBP10.99□□□□□ -0.65
HDAC6-228ENST00000486227 FGFR3P22607 806 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 RPL26P61254 145 aaKnown RBP10.99□□□□□ -0.65
HDAC6-228ENST00000486227 SKP1P63208 163 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 PITX1P78337 314 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-228ENST00000486227 TSTD2Q5T7W7 516 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 SLC9A4Q6AI14 798 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 CCDC81Q6ZN84 652 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 NANOGNBQ7Z5D8 188 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 SERINC5Q86VE9 423 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 SMG8Q8ND04 991 aaKnown RBP10.99□□□□□ -0.65
HDAC6-228ENST00000486227 ING5Q8WYH8 240 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 BDH2Q9BUT1 245 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 POLR1BQ9H9Y6 1135 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 ZFP14Q9HCL3 533 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 ANKRD36CQ5JPF3 1778 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 CXorf49A8MYA2 514 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-228ENST00000486227 TK2O00142 265 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 AZIN1O14977 448 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 STBD1O95210 358 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 MLYCDO95822 493 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 ABCB1P08183 1280 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-228ENST00000486227 SNRPB2P08579 225 aaKnown RBP10.99□□□□□ -0.65
HDAC6-228ENST00000486227 IMPDH2P12268 514 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 JAK1P23458 1154 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 CHI3L1P36222 383 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-228ENST00000486227 NEK3P51956 506 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 CLDN10P78369 228 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 ACSM2AQ08AH3 577 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 ACSM2BQ68CK6 577 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 FBXL22Q6P050 247 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 IFNLR1Q8IU57 520 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-228ENST00000486227 RBFAQ8N0V3 343 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 CLYBLQ8N0X4 340 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 AUTS2Q8WXX7 1259 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 COX4I2Q96KJ9 171 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms