RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 ETV3P41162 512 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 RABIFP47224 123 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 GEMP55040 296 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 C21orf59P57076 290 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 ARHGEF7Q14155 803 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 ACOX1Q15067 660 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 SLC1A5Q15758 541 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 P3H1Q32P28 736 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 SIRPB2Q5JXA9 342 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 ARHGAP40Q5TG30 622 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 FAXCQ5TGI0 409 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 PAPD7Q5XG87 772 aaKnown RBP12.88□□□□□ -0.35
SSR4-211ENST00000486204 DENND2CQ68D51 928 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 TTC27Q6P3X3 843 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 RANBP10Q6VN20 620 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 Q6ZSR6 202 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 ARHGEF18Q6ZSZ5 1173 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 Q6ZVL8 140 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 LYSMD3Q7Z3D4 306 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 PTAR1Q7Z6K3 402 aaPredicted RBP12.88□□□□□ -0.35
SSR4-211ENST00000486204 PRUNE1Q86TP1 453 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 ACTRT1Q8TDG2 376 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 SKA1Q96BD8 255 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 ELF4Q99607 663 aaPredicted RBP12.88□□□□□ -0.35
SSR4-211ENST00000486204 ERVMER34-1Q9H9K5 563 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 MAGEE1Q9HCI5 957 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 GDF3Q9NR23 364 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 PNMA8BQ9ULN7 279 aaPredicted RBP12.88□□□□□ -0.35
SSR4-211ENST00000486204 ZNF148Q9UQR1 794 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 DRG1Q9Y295 367 aaKnown RBP12.88□□□□□ -0.35
SSR4-211ENST00000486204 ZNF711Q9Y462 761 aa12.88□□□□□ -0.35
SSR4-211ENST00000486204 C1orf232A0A0U1RR37 186 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 SPTY2D1-AS1A0A0U1RR47 76 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 PGRMC1O00264 195 aaKnown RBP12.87□□□□□ -0.35
SSR4-211ENST00000486204 MAGEC1O60732 1142 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 RFPL3O75679 317 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 AGTP01019 485 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 PCCBP05166 539 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 FGF1P05230 155 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 ETS1P14921 441 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 TCP1P17987 556 aaKnown RBP12.87□□□□□ -0.35
SSR4-211ENST00000486204 HLA-DPA1P20036 260 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 TMPRSS3P57727 454 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 YPEL5P62699 121 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 IL9RQ01113 521 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 MSLNQ13421 630 aaPredicted RBP12.87□□□□□ -0.35
SSR4-211ENST00000486204 MTM1Q13496 603 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 FZD2Q14332 565 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 CYP1B1Q16678 543 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 PARP6Q2NL67 630 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 COLEC12Q5KU26 742 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 PRAMEF14Q5SWL7 426 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 HES3Q5TGS1 186 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 BROXQ5VW32 411 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 DENND5AQ6IQ26 1287 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 NYAP1Q6ZVC0 841 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 KANSL1Q7Z3B3 1105 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 RAVER1Q8IY67 606 aaKnown RBP12.87□□□□□ -0.35
SSR4-211ENST00000486204 FICDQ9BVA6 458 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 FSD1LQ9BXM9 530 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 ABCG8Q9H221 673 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 CPNE5Q9HCH3 593 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.87□□□□□ -0.35
SSR4-211ENST00000486204 IL17BQ9UHF5 180 aa12.87□□□□□ -0.35
SSR4-211ENST00000486204 AAR2Q9Y312 384 aaKnown RBP12.87□□□□□ -0.35
SSR4-211ENST00000486204 TOR1BO14657 336 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 AURKAO14965 403 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 LDOC1O95751 146 aaPredicted RBP12.86□□□□□ -0.35
SSR4-211ENST00000486204 ZSCAN5DPP0CG00 497 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 TRIM23P36406 574 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 KCNJ1P48048 391 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 RXRGP48443 463 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 SPINT3P49223 89 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 DPTQ07507 201 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 EIF2B5Q13144 721 aaKnown RBP12.86□□□□□ -0.35
SSR4-211ENST00000486204 DNAJC3Q13217 504 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 PDE1CQ14123 709 aaPredicted RBP12.86□□□□□ -0.35
SSR4-211ENST00000486204 INPP5AQ14642 412 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 KCTD19Q17RG1 926 aaPredicted RBP12.86□□□□□ -0.35
SSR4-211ENST00000486204 TBC1D25Q3MII6 688 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 PNCKQ6P2M8 343 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 ZNF765Q7L2R6 523 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 TMC3Q7Z5M5 1100 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 DCP2Q8IU60 420 aaKnown RBP12.86□□□□□ -0.35
SSR4-211ENST00000486204 TTC30BQ8N4P2 665 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 SLC25A41Q8N5S1 370 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 FUBP1Q96AE4 644 aaKnown RBP12.86□□□□□ -0.35
SSR4-211ENST00000486204 MED8Q96G25 268 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 NAF1Q96HR8 494 aaKnown RBP12.86□□□□□ -0.35
SSR4-211ENST00000486204 CNDP2Q96KP4 475 aaKnown RBP12.86□□□□□ -0.35
SSR4-211ENST00000486204 PPP1R2P1Q96PQ5 205 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 NAPGQ99747 312 aaPredicted RBP12.86□□□□□ -0.35
SSR4-211ENST00000486204 APOL2Q9BQE5 337 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 APOOQ9BUR5 198 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 AP1M1Q9BXS5 423 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 ARNT2Q9HBZ2 717 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 KCTD5Q9NXV2 234 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 NFKBIL1Q9UBC1 381 aaPredicted RBP12.86□□□□□ -0.35
SSR4-211ENST00000486204 CD84Q9UIB8 345 aa12.86□□□□□ -0.35
SSR4-211ENST00000486204 SHOC2Q9UQ13 582 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms