RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 RTP4Q96DX8 246 aa12.39□□□□□ -0.43
HMG20B-211ENST00000486028 HIC2Q96JB3 615 aa12.39□□□□□ -0.43
HMG20B-211ENST00000486028 GORASP1Q9BQQ3 440 aa12.39□□□□□ -0.43
HMG20B-211ENST00000486028 LRRC61Q9BV99 259 aa12.39□□□□□ -0.43
HMG20B-211ENST00000486028 FGF22Q9HCT0 170 aa12.39□□□□□ -0.43
HMG20B-211ENST00000486028 EVA1BQ9NVM1 165 aa12.39□□□□□ -0.43
HMG20B-211ENST00000486028 NCKIPSDQ9NZQ3 722 aa12.39□□□□□ -0.43
HMG20B-211ENST00000486028 MOSPD1Q9UJG1 213 aa12.39□□□□□ -0.43
HMG20B-211ENST00000486028 PNMA8BQ9ULN7 279 aaPredicted RBP12.39□□□□□ -0.43
HMG20B-211ENST00000486028 DOLKQ9UPQ8 538 aa12.39□□□□□ -0.43
HMG20B-211ENST00000486028 SPO11Q9Y5K1 396 aa12.39□□□□□ -0.43
HMG20B-211ENST00000486028 TP53BP1Q12888 1972 aaPredicted RBP12.39□□□□□ -0.43
HMG20B-211ENST00000486028 PRSS38A1L453 326 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 METTL18O95568 372 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 SOD1P00441 154 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 IFNB1P01574 187 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 CEACAM5P06731 702 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 GIMD1P0DJR0 217 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 ADRA1AP35348 466 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 GDF10P55107 478 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 DCDC1P59894 354 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 FOXC1Q12948 553 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 SIX1Q15475 284 aaPredicted RBP12.38□□□□□ -0.43
HMG20B-211ENST00000486028 DEFB133Q30KQ1 61 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 PROX2Q3B8N5 592 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 CCDC157Q569K6 752 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 ZDHHC20Q5W0Z9 365 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 ALS2CLQ60I27 953 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 DRICH1Q6PGQ1 229 aaPredicted RBP12.38□□□□□ -0.43
HMG20B-211ENST00000486028 LVRNQ6Q4G3 990 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 SLCO6A1Q86UG4 719 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 GKN2Q86XP6 184 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 SLC35F6Q8N357 371 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 FAM181AQ8N9Y4 354 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 BLOC1S5Q8TDH9 187 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 GLMNQ92990 594 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 PDXPQ96GD0 296 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 WDR24Q96S15 920 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 AGAP2Q99490 1192 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 TBL1YQ9BQ87 522 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 APOL2Q9BQE5 337 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 SPATA16Q9BXB7 569 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 FRMD8Q9BZ67 464 aaPredicted RBP12.38□□□□□ -0.43
HMG20B-211ENST00000486028 CYP4F12Q9HCS2 524 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 FEZ2Q9UHY8 353 aaPredicted RBP12.38□□□□□ -0.43
HMG20B-211ENST00000486028 DRG1Q9Y295 367 aaKnown RBP12.38□□□□□ -0.43
HMG20B-211ENST00000486028 SLC17A4Q9Y2C5 497 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 PCDHGA1Q9Y5H4 931 aa12.38□□□□□ -0.43
HMG20B-211ENST00000486028 GOLGA4Q13439 2230 aaKnown RBP12.38□□□□□ -0.43
HMG20B-211ENST00000486028 C2orf81A6NN90 581 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 AURKAO14965 403 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 INPP4BO15327 924 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 YY2O15391 372 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 PPFIA2O75334 1257 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 IVLP07476 585 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 CDK4P11802 303 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 BPIP17213 487 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 PMLP29590 882 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 HMGCLP35914 325 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 RPIAP49247 311 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 DUSP3P51452 185 aaPredicted RBP12.37□□□□□ -0.43
HMG20B-211ENST00000486028 DAB2P98082 770 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 ILKQ13418 452 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 PDPK2PQ6A1A2 396 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 ZCCHC8Q6NZY4 707 aaKnown RBP12.37□□□□□ -0.43
HMG20B-211ENST00000486028 DOK6Q6PKX4 331 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 GLT6D1Q7Z4J2 308 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 KLHDC8BQ8IXV7 354 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 TTC30BQ8N4P2 665 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 TRAM1L1Q8N609 369 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 PNPLA1Q8N8W4 532 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 CCDC89Q8N998 374 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 GPR26Q8NDV2 337 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 ADAMTS14Q8WXS8 1223 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 COX14Q96I36 57 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 NAP1L3Q99457 506 aaPredicted RBP12.37□□□□□ -0.43
HMG20B-211ENST00000486028 ZSCAN5AQ9BUG6 496 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 CLPBQ9H078 707 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 LRRC40Q9H9A6 602 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 CARS2Q9HA77 564 aaKnown RBP12.37□□□□□ -0.43
HMG20B-211ENST00000486028 MRPL40Q9NQ50 206 aaKnown RBP12.37□□□□□ -0.43
HMG20B-211ENST00000486028 TOR4AQ9NXH8 423 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.37□□□□□ -0.43
HMG20B-211ENST00000486028 NFKBIL1Q9UBC1 381 aaPredicted RBP12.37□□□□□ -0.43
HMG20B-211ENST00000486028 CNOT6Q9ULM6 557 aaKnown RBP12.37□□□□□ -0.43
HMG20B-211ENST00000486028 TMEM98Q9Y2Y6 226 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 BOLA1Q9Y3E2 137 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 PKP3Q9Y446 797 aa12.37□□□□□ -0.43
HMG20B-211ENST00000486028 ERI2A8K979 691 aaKnown RBP12.36□□□□□ -0.43
HMG20B-211ENST00000486028 FADS2P1A8MWK0 482 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 DKK1O94907 266 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 ASMTLO95671 621 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 CKMT1AP12532 417 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 ACP1P24666 158 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 FDFT1P37268 417 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 GNPDA1P46926 289 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 POLD2P49005 469 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 DNAJC3Q13217 504 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 SPARCL1Q14515 664 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 TCEA2Q15560 299 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms