RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 RAD18Q9NS91 495 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.98□□□□□ -1.29
VPS50-218ENST00000485994 VPS18Q9P253 973 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 NFKBIL1Q9UBC1 381 aaPredicted RBP6.98□□□□□ -1.29
VPS50-218ENST00000485994 TRHDEQ9UKU6 1024 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 HEY1Q9Y5J3 304 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 ZFYVE26Q68DK2 2539 aa6.98□□□□□ -1.29
VPS50-218ENST00000485994 COL27A1Q8IZC6 1860 aaPredicted RBP6.98□□□□□ -1.29
VPS50-218ENST00000485994 ZFHX4Q86UP3 3567 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 CPED1A4D0V7 1026 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 FAM149AA5PLN7 773 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 A8MX80 341 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 GPR89AB7ZAQ6 455 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 ZW10O43264 779 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 NOBOXO60393 691 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 KRT37O76014 449 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 IPO7O95373 1038 aaKnown RBP6.97□□□□□ -1.29
VPS50-218ENST00000485994 MAP3K6O95382 1288 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 CLDN7O95471 211 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 KRT1P04264 644 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 GPR89BP0CG08 455 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 PTPN3P26045 913 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 CTNNA2P26232 953 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 CTNNA1P35221 906 aaKnown RBP6.97□□□□□ -1.29
VPS50-218ENST00000485994 CD86P42081 329 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 GPR1P46091 355 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 SPINT3P49223 89 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 CLCNKAP51800 687 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 VAV2P52735 878 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 DCDC1P59894 354 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 ERVPABLB-1P60509 514 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 CDK3Q00526 305 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 ADCY2Q08462 1091 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 WASHC5Q12768 1159 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 LRP8Q14114 963 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 NR1D2Q14995 579 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 ISXQ2M1V0 245 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 PYCR3Q53H96 274 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 HENMT1Q5T8I9 393 aaKnown RBP6.97□□□□□ -1.29
VPS50-218ENST00000485994 PDPK2PQ6A1A2 396 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 GUSBP11Q6P575 273 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 NPNTQ6UXI9 565 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 DAAM2Q86T65 1068 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 TSPAN33Q86UF1 283 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 HEATR4Q86WZ0 1026 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 NRROSQ86YC3 692 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 TMEM139Q8IV31 216 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 RNF10Q8N5U6 811 aaKnown RBP6.97□□□□□ -1.29
VPS50-218ENST00000485994 LRRC57Q8N9N7 239 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 KIAA1524Q8TCG1 905 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 MAPK15Q8TD08 544 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 TFB1MQ8WVM0 346 aaKnown RBP6.97□□□□□ -1.29
VPS50-218ENST00000485994 FGF11Q92914 225 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 AP2M1Q96CW1 435 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 EID2BQ96D98 161 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 HIC2Q96JB3 615 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 ZNF578Q96N58 590 aaPredicted RBP6.97□□□□□ -1.29
VPS50-218ENST00000485994 FCRL5Q96RD9 977 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 GSDMCQ9BYG8 508 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 B3GNT4Q9C0J1 378 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 LACRTQ9GZZ8 138 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 TMEM168Q9H0V1 697 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 FAM83DQ9H4H8 585 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 TRABDQ9H4I3 376 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 CAAP1Q9H8G2 361 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 RMI1Q9H9A7 625 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 ZFYVE1Q9HBF4 777 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 CYP4F12Q9HCS2 524 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 FGF22Q9HCT0 170 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 PKD2L2Q9NZM6 624 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 FAM153AQ9UHL3 310 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 CNOT6Q9ULM6 557 aaKnown RBP6.97□□□□□ -1.29
VPS50-218ENST00000485994 GPR34Q9UPC5 381 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 DOLKQ9UPQ8 538 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 REXO2Q9Y3B8 237 aaKnown RBP6.97□□□□□ -1.29
VPS50-218ENST00000485994 GPSM3Q9Y4H4 160 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 PCDHGA8Q9Y5G5 932 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 CELSR3Q9NYQ7 3312 aa6.97□□□□□ -1.29
VPS50-218ENST00000485994 CACNA1GO43497 2377 aa6.96□□□□□ -1.29
VPS50-218ENST00000485994 SOWAHDA6NJG2 315 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 MIF4GDA9UHW6 222 aaKnown RBP6.96□□□□□ -1.3
VPS50-218ENST00000485994 DNAJC6O75061 913 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 PPFIA2O75334 1257 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 NDST3O95803 873 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 FGF1P05230 155 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 CELA2BP08218 269 aaPredicted RBP6.96□□□□□ -1.3
VPS50-218ENST00000485994 CTPS1P17812 591 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 CD68P34810 354 aaPredicted RBP6.96□□□□□ -1.3
VPS50-218ENST00000485994 ACTN2P35609 894 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 HMGCLP35914 325 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 ADCY8P40145 1251 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 EIF2S3P41091 472 aaKnown RBP6.96□□□□□ -1.3
VPS50-218ENST00000485994 CETN2P41208 172 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 GPR3P46089 330 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 RWDD2BP57060 319 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 ILF3Q12906 894 aaKnown RBP eCLIP6.96□□□□□ -1.3
VPS50-218ENST00000485994 EIF3IQ13347 325 aaKnown RBP6.96□□□□□ -1.3
VPS50-218ENST00000485994 MPP3Q13368 585 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 HLTFQ14527 1009 aaKnown RBP eCLIP6.96□□□□□ -1.3
VPS50-218ENST00000485994 PTPRRQ15256 657 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms