RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 ZNF217O75362 1048 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 ZNF821O75541 412 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-216ENST00000484087 ZMPSTE24O75844 475 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 SEMA4FO95754 770 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 ASLP04424 464 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 HLA-DQB2P05538 268 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 SRPRAP08240 638 aaKnown RBP6.94□□□□□ -1.3
BRCA1-216ENST00000484087 MAT2AP31153 395 aaKnown RBP6.94□□□□□ -1.3
BRCA1-216ENST00000484087 SLC8A1P32418 973 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 RPA3P35244 121 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-216ENST00000484087 SPRP35270 261 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-216ENST00000484087 GP5P40197 560 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 HNRNPH2P55795 449 aaKnown RBP6.94□□□□□ -1.3
BRCA1-216ENST00000484087 OXCT1P55809 520 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 CRADDP78560 199 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 PDE1BQ01064 536 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 BNC1Q01954 994 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 GNA12Q03113 381 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 SERINC3Q13530 473 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 RFTN1Q14699 578 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-216ENST00000484087 NR6A1Q15406 480 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 ANKRD20A4Q4UJ75 823 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 PCID2Q5JVF3 399 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 ATXN7L2Q5T6C5 722 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-216ENST00000484087 GRTP1Q5TC63 336 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 STPG1Q5TH74 334 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 PDPK2PQ6A1A2 396 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 C22orf39Q6P5X5 142 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 TRMT10BQ6PF06 316 aaKnown RBP6.94□□□□□ -1.3
BRCA1-216ENST00000484087 NCEH1Q6PIU2 408 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 TREML4Q6UXN2 200 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 SETD3Q86TU7 594 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-216ENST00000484087 TMEM135Q86UB9 458 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 SYT12Q8IV01 421 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 TRIM42Q8IWZ5 723 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 KLHDC8BQ8IXV7 354 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 HDDC3Q8N4P3 179 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.94□□□□□ -1.3
BRCA1-216ENST00000484087 TEX26Q8N6G2 289 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 CNTD1Q8N815 330 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 DCAF4L2Q8NA75 395 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 ACMSDQ8TDX5 336 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 KLK6Q92876 244 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 ARRDC3Q96B67 414 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 BIRC7Q96CA5 298 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 LOXL4Q96JB6 756 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 CABS1Q96KC9 395 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 SLC6A18Q96N87 628 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 CPNE1Q99829 537 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 PLCD4Q9BRC7 762 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 FICDQ9BVA6 458 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 PRR14Q9BWN1 585 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 POLR1EQ9GZS1 481 aaKnown RBP6.94□□□□□ -1.3
BRCA1-216ENST00000484087 IL21RQ9HBE5 538 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 MLXIPLQ9NP71 852 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 DLL3Q9NYJ7 618 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 GGT7Q9UJ14 662 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 SOX13Q9UN79 622 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 PCDHGA5Q9Y5G8 931 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 CACNA1EQ15878 2313 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 CNOT1A5YKK6 2376 aaKnown RBP6.94□□□□□ -1.3
BRCA1-216ENST00000484087 AKAP13Q12802 2813 aa6.94□□□□□ -1.3
BRCA1-216ENST00000484087 ILVBLA1L0T0 632 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 TTC24A2A3L6 582 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-216ENST00000484087 CXorf49A8MYA2 514 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-216ENST00000484087 FOXO6A8MYZ6 492 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 RNF223E7ERA6 249 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 GOLGA8RI6L899 631 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 J3KR12 359 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 KHNYNO15037 678 aaKnown RBP6.93□□□□□ -1.3
BRCA1-216ENST00000484087 NPC1O15118 1278 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 TYROBPO43914 113 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 PRAMEF11O60813 436 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 PMPCBO75439 489 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 PIAS1O75925 651 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 FAM155BO75949 473 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 ASMTLO95671 621 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 MT-CYBP00156 380 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-216ENST00000484087 IGHV4-34P06331 123 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 DRD4P21917 467 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 CES1P23141 567 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 ADRA1DP25100 572 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 HADHAP40939 763 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 SLC19A1P41440 591 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 CSNK1EP49674 416 aaKnown RBP6.93□□□□□ -1.3
BRCA1-216ENST00000484087 SERPINH1P50454 418 aaKnown RBP6.93□□□□□ -1.3
BRCA1-216ENST00000484087 PLK1P53350 603 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 ADPRHP54922 357 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 WNT3AP56704 352 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 PRR20EP86478 221 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 PRR20CP86479 221 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 PRR20DP86480 221 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 PRR20BP86481 221 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 PRR20AP86496 221 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 SEMG2Q02383 582 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 SLC18A2Q05940 514 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 NIPAL4Q0D2K0 466 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 CNTN1Q12860 1018 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 GRIK2Q13002 908 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 ELAVL3Q14576 367 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms