RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 PHTF1Q9UMS5 762 aa12.8□□□□□ -0.36
UBR4-213ENST00000483922 OAS3Q9Y6K5 1087 aaKnown RBP12.8□□□□□ -0.36
UBR4-213ENST00000483922 GOLGA6CA6NDK9 693 aa12.79□□□□□ -0.36
UBR4-213ENST00000483922 GOLGA6BA6NDN3 693 aa12.79□□□□□ -0.36
UBR4-213ENST00000483922 ZW10O43264 779 aa12.79□□□□□ -0.36
UBR4-213ENST00000483922 FZD6O60353 706 aa12.79□□□□□ -0.36
UBR4-213ENST00000483922 MAFKO60675 156 aa12.79□□□□□ -0.36
UBR4-213ENST00000483922 PGLSO95336 258 aa12.79□□□□□ -0.36
UBR4-213ENST00000483922 CPP00450 1065 aa12.79□□□□□ -0.36
UBR4-213ENST00000483922 GOLGA6DP0CG33 693 aa12.79□□□□□ -0.36
UBR4-213ENST00000483922 TCN2P20062 427 aa12.79□□□□□ -0.36
UBR4-213ENST00000483922 GNLYP22749 145 aa12.79□□□□□ -0.36
UBR4-213ENST00000483922 BIRC2Q13490 618 aa12.79□□□□□ -0.36
UBR4-213ENST00000483922 MAMLD1Q13495 774 aa12.79□□□□□ -0.36
UBR4-213ENST00000483922 DPYSQ14117 519 aa12.79□□□□□ -0.36
UBR4-213ENST00000483922 ERMARDQ5T6L9 678 aa12.79□□□□□ -0.36
UBR4-213ENST00000483922 IYDQ6PHW0 289 aa12.79□□□□□ -0.36
UBR4-213ENST00000483922 CEACAM20Q6UY09 585 aa12.79□□□□□ -0.36
UBR4-213ENST00000483922 AGPAT1Q99943 283 aa12.79□□□□□ -0.36
UBR4-213ENST00000483922 SYT11Q9BT88 431 aa12.79□□□□□ -0.36
UBR4-213ENST00000483922 TBC1D10AQ9BXI6 508 aa12.79□□□□□ -0.36
UBR4-213ENST00000483922 SP110Q9HB58 689 aa12.79□□□□□ -0.36
UBR4-213ENST00000483922 GOLGA6AQ9NYA3 693 aa12.79□□□□□ -0.36
UBR4-213ENST00000483922 RPS6KL1Q9Y6S9 549 aa12.79□□□□□ -0.36
UBR4-213ENST00000483922 SPTBN1Q01082 2364 aaKnown RBP12.79□□□□□ -0.36
UBR4-213ENST00000483922 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.78□□□□□ -0.36
UBR4-213ENST00000483922 PSMD11O00231 422 aa12.78□□□□□ -0.36
UBR4-213ENST00000483922 SOCS5O75159 536 aa12.78□□□□□ -0.36
UBR4-213ENST00000483922 SEMA7AO75326 666 aa12.78□□□□□ -0.36
UBR4-213ENST00000483922 ATP1A1P05023 1023 aaKnown RBP12.78□□□□□ -0.36
UBR4-213ENST00000483922 EEF1GP26641 437 aaKnown RBP12.78□□□□□ -0.36
UBR4-213ENST00000483922 GPR1P46091 355 aa12.78□□□□□ -0.36
UBR4-213ENST00000483922 ERV3-1Q14264 604 aa12.78□□□□□ -0.36
UBR4-213ENST00000483922 KRT31Q15323 416 aa12.78□□□□□ -0.36
UBR4-213ENST00000483922 CDKAL1Q5VV42 579 aa12.78□□□□□ -0.36
UBR4-213ENST00000483922 CAPRIN2Q6IMN6 1127 aaKnown RBP12.78□□□□□ -0.36
UBR4-213ENST00000483922 ACAD10Q6JQN1 1059 aa12.78□□□□□ -0.36
UBR4-213ENST00000483922 TCTN3Q6NUS6 607 aa12.78□□□□□ -0.36
UBR4-213ENST00000483922 KDELC2Q7Z4H8 507 aa12.78□□□□□ -0.36
UBR4-213ENST00000483922 PAF1Q8N7H5 531 aa12.78□□□□□ -0.36
UBR4-213ENST00000483922 OR10G6Q8NH81 332 aa12.78□□□□□ -0.36
UBR4-213ENST00000483922 KIAA1143Q96AT1 154 aaPredicted RBP12.78□□□□□ -0.36
UBR4-213ENST00000483922 AHCYL2Q96HN2 611 aaKnown RBP12.78□□□□□ -0.36
UBR4-213ENST00000483922 ZNF599Q96NL3 588 aa12.78□□□□□ -0.36
UBR4-213ENST00000483922 MGME1Q9BQP7 344 aa12.78□□□□□ -0.36
UBR4-213ENST00000483922 ZPBPQ9BS86 351 aa12.78□□□□□ -0.36
UBR4-213ENST00000483922 AKIRIN1Q9H9L7 192 aaPredicted RBP12.78□□□□□ -0.36
UBR4-213ENST00000483922 SARS2Q9NP81 518 aaKnown RBP12.78□□□□□ -0.36
UBR4-213ENST00000483922 SCHIP1Q9P0W5 487 aaPredicted RBP12.78□□□□□ -0.36
UBR4-213ENST00000483922 KLHL3Q9UH77 587 aa12.78□□□□□ -0.36
UBR4-213ENST00000483922 TLK1Q9UKI8 766 aa12.78□□□□□ -0.36
UBR4-213ENST00000483922 TMEM191CA6NGB0 347 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 POLR1CO15160 346 aaPredicted RBP12.77□□□□□ -0.37
UBR4-213ENST00000483922 INPP4BO15327 924 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 DNAJB5O75953 348 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 CYP2A6P11509 494 aaPredicted RBP12.77□□□□□ -0.37
UBR4-213ENST00000483922 TCF4P15884 667 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 AMPD1P23109 780 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 MIPP30301 263 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 HCAR3P49019 387 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 RENBPP51606 427 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 GFERP55789 205 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 SH3BP2P78314 561 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 HHEXQ03014 270 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 MAP7Q14244 749 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 PPP6R3Q5H9R7 873 aaPredicted RBP12.77□□□□□ -0.37
UBR4-213ENST00000483922 TMCO4Q5TGY1 634 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 LRRC66Q68CR7 880 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 ASB18Q6ZVZ8 466 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 CHST15Q7LFX5 561 aaPredicted RBP12.77□□□□□ -0.37
UBR4-213ENST00000483922 NLRP8Q86W28 1048 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 AP2M1Q96CW1 435 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 EFHD1Q9BUP0 239 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 RIOK2Q9BVS4 552 aaKnown RBP12.77□□□□□ -0.37
UBR4-213ENST00000483922 TRIM55Q9BYV6 548 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 CLSTN2Q9H4D0 955 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 KCTD5Q9NXV2 234 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 ZNHIT2Q9UHR6 403 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 CROTQ9UKG9 612 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 KCNK6Q9Y257 313 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 KCTD3Q9Y597 815 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 SLC30A1Q9Y6M5 507 aa12.77□□□□□ -0.37
UBR4-213ENST00000483922 TEP1Q99973 2627 aaKnown RBP12.77□□□□□ -0.37
UBR4-213ENST00000483922 A0A1W2PQ67 120 aa12.76□□□□□ -0.37
UBR4-213ENST00000483922 DAPK3O43293 454 aa12.76□□□□□ -0.37
UBR4-213ENST00000483922 ATMINO43313 823 aaPredicted RBP12.76□□□□□ -0.37
UBR4-213ENST00000483922 C9P02748 559 aa12.76□□□□□ -0.37
UBR4-213ENST00000483922 IL1R2P27930 398 aa12.76□□□□□ -0.37
UBR4-213ENST00000483922 DLSTP36957 453 aa12.76□□□□□ -0.37
UBR4-213ENST00000483922 UBE2HP62256 183 aa12.76□□□□□ -0.37
UBR4-213ENST00000483922 SYCP1Q15431 976 aa12.76□□□□□ -0.37
UBR4-213ENST00000483922 PLEKHA7Q6IQ23 1121 aa12.76□□□□□ -0.37
UBR4-213ENST00000483922 DCUN1D2Q6PH85 259 aa12.76□□□□□ -0.37
UBR4-213ENST00000483922 IRF2BP2Q7Z5L9 587 aa12.76□□□□□ -0.37
UBR4-213ENST00000483922 GALNT13Q8IUC8 556 aa12.76□□□□□ -0.37
UBR4-213ENST00000483922 CCDC13Q8IYE1 715 aa12.76□□□□□ -0.37
UBR4-213ENST00000483922 TEX19Q8NA77 164 aa12.76□□□□□ -0.37
UBR4-213ENST00000483922 GALNT6Q8NCL4 622 aa12.76□□□□□ -0.37
UBR4-213ENST00000483922 RUFY1Q96T51 708 aa12.76□□□□□ -0.37
UBR4-213ENST00000483922 TRIT1Q9H3H1 467 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms