RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 SYTL2Q9HCH5 934 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 NPHS2Q9NP85 383 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 SRP72O76094 671 aaKnown RBP26.13■■□□□ 1.77
SHOX2-204ENST00000483851 CLDN7O95471 211 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 EIF2DP41214 584 aaKnown RBP26.13■■□□□ 1.77
SHOX2-204ENST00000483851 DLG1Q12959 904 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 GPR33Q49SQ1 333 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 PREPLQ4J6C6 727 aaPredicted RBP26.13■■□□□ 1.77
SHOX2-204ENST00000483851 SNX20Q7Z614 316 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 PIANPQ8IYJ0 282 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 HEXDCQ8WVB3 486 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 SORCS1Q8WY21 1168 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 KLHL29Q96CT2 875 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 TAS2R13Q9NYV9 303 aa26.13■■□□□ 1.77
SHOX2-204ENST00000483851 KIAA1549LQ6ZVL6 1849 aa26.12■■□□□ 1.77
SHOX2-204ENST00000483851 PRRC2BQ5JSZ5 2229 aaKnown RBP26.12■■□□□ 1.77
SHOX2-204ENST00000483851 NPIPB15A6NHN6 443 aaPredicted RBP26.12■■□□□ 1.77
SHOX2-204ENST00000483851 TMEM114B3SHH9 223 aa26.12■■□□□ 1.77
SHOX2-204ENST00000483851 PSMC3P17980 439 aa26.12■■□□□ 1.77
SHOX2-204ENST00000483851 ITGALP20701 1170 aa26.12■■□□□ 1.77
SHOX2-204ENST00000483851 MTHFRP42898 656 aa26.12■■□□□ 1.77
SHOX2-204ENST00000483851 RUNX3Q13761 415 aa26.12■■□□□ 1.77
SHOX2-204ENST00000483851 RFWD2Q8NHY2 731 aa26.12■■□□□ 1.77
SHOX2-204ENST00000483851 KLHL32Q96NJ5 620 aa26.12■■□□□ 1.77
SHOX2-204ENST00000483851 TXLNGQ9NUQ3 528 aa26.12■■□□□ 1.77
SHOX2-204ENST00000483851 IL36AQ9UHA7 158 aa26.12■■□□□ 1.77
SHOX2-204ENST00000483851 CDH22Q9UJ99 828 aa26.12■■□□□ 1.77
SHOX2-204ENST00000483851 MYO9BQ13459 2157 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 UBA6A0AVT1 1052 aaPredicted RBP26.11■■□□□ 1.77
SHOX2-204ENST00000483851 OTOL1A6NHN0 477 aaPredicted RBP26.11■■□□□ 1.77
SHOX2-204ENST00000483851 PALM2-AKAP2B1ALY0 433 aaPredicted RBP26.11■■□□□ 1.77
SHOX2-204ENST00000483851 ATP5HO75947 161 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 ESR1P03372 595 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 PYGLP06737 847 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 SBK3P0C264 359 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 CCDC166P0CW27 439 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 PKMP14618 531 aaKnown RBP26.11■■□□□ 1.77
SHOX2-204ENST00000483851 ZNF30P17039 623 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 SPAM1P38567 509 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 CSHL1Q14406 222 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 CTC1Q2NKJ3 1217 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 LIPMQ5VYY2 423 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 MAGEC3Q8TD91 643 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 CCDC126Q96EE4 140 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 MYADMQ96S97 322 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 ZNF576Q9H609 170 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 KCNK13Q9HB14 408 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 XPR1Q9UBH6 696 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 PCDHB1Q9Y5F3 818 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 TRBV5-4A0A0C4DH59 114 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 GOLGA8CPA6NN73 597 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 TK2O00142 265 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 PRSS56P0CW18 603 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 CYP2A6P11509 494 aaPredicted RBP26.11■■□□□ 1.77
SHOX2-204ENST00000483851 LAMP2P13473 410 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 BPIP17213 487 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 SLC1A6P48664 564 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 CES4AQ5XG92 561 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 PNPLA1Q8N8W4 532 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 BIRC8Q96P09 236 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 IL26Q9NPH9 171 aa26.11■■□□□ 1.77
SHOX2-204ENST00000483851 GLYATL1P3A0A0U1RQE8 302 aa26.1■■□□□ 1.77
SHOX2-204ENST00000483851 PRAMEF1O95521 474 aa26.1■■□□□ 1.77
SHOX2-204ENST00000483851 T-ENOLP0DO92 83 aa26.1■■□□□ 1.77
SHOX2-204ENST00000483851 SLC6A11P48066 632 aa26.1■■□□□ 1.77
SHOX2-204ENST00000483851 TIAL1Q01085 375 aaKnown RBP eCLIP26.1■■□□□ 1.77
SHOX2-204ENST00000483851 OVGP1Q12889 678 aa26.1■■□□□ 1.77
SHOX2-204ENST00000483851 ITGA9Q13797 1035 aa26.1■■□□□ 1.77
SHOX2-204ENST00000483851 SNCBQ16143 134 aa26.1■■□□□ 1.77
SHOX2-204ENST00000483851 TECRLQ5HYJ1 363 aa26.1■■□□□ 1.77
SHOX2-204ENST00000483851 PHTF2Q8N3S3 785 aa26.1■■□□□ 1.77
SHOX2-204ENST00000483851 PPP4R1Q8TF05 950 aa26.1■■□□□ 1.77
SHOX2-204ENST00000483851 PLEKHG4BQ96PX9 1271 aa26.1■■□□□ 1.77
SHOX2-204ENST00000483851 CPSF2Q9P2I0 782 aaKnown RBP26.1■■□□□ 1.77
SHOX2-204ENST00000483851 TRIM33Q9UPN9 1127 aa26.1■■□□□ 1.77
SHOX2-204ENST00000483851 NUMBLQ9Y6R0 609 aa26.1■■□□□ 1.77
SHOX2-204ENST00000483851 CCDC189A1A4V9 331 aa26.09■■□□□ 1.77
SHOX2-204ENST00000483851 AGAP14A8MT82 685 aa26.09■■□□□ 1.77
SHOX2-204ENST00000483851 PRRT4C9JH25 899 aa26.09■■□□□ 1.77
SHOX2-204ENST00000483851 GAPDHSO14556 408 aaPredicted RBP26.09■■□□□ 1.77
SHOX2-204ENST00000483851 HGSO14964 777 aaPredicted RBP26.09■■□□□ 1.77
SHOX2-204ENST00000483851 ECI2O75521 394 aa26.09■■□□□ 1.77
SHOX2-204ENST00000483851 LEFTY1O75610 366 aa26.09■■□□□ 1.77
SHOX2-204ENST00000483851 RHOBTB1O94844 696 aa26.09■■□□□ 1.77
SHOX2-204ENST00000483851 SNUPNO95149 360 aaKnown RBP26.09■■□□□ 1.77
SHOX2-204ENST00000483851 ZNF37AP17032 561 aaPredicted RBP26.09■■□□□ 1.77
SHOX2-204ENST00000483851 RPS3P23396 243 aaKnown RBP eCLIP26.09■■□□□ 1.77
SHOX2-204ENST00000483851 GLRBP48167 497 aa26.09■■□□□ 1.77
SHOX2-204ENST00000483851 CDKN1CP49918 316 aaPredicted RBP26.09■■□□□ 1.77
SHOX2-204ENST00000483851 PGGT1BP53609 377 aa26.09■■□□□ 1.77
SHOX2-204ENST00000483851 PDAP1Q13442 181 aaKnown RBP26.09■■□□□ 1.77
SHOX2-204ENST00000483851 NFATC2Q13469 925 aa26.09■■□□□ 1.77
SHOX2-204ENST00000483851 ZNF805Q5CZA5 627 aa26.09■■□□□ 1.77
SHOX2-204ENST00000483851 LRRC66Q68CR7 880 aa26.09■■□□□ 1.77
SHOX2-204ENST00000483851 ZCCHC23Q6ZST2 131 aa26.09■■□□□ 1.77
SHOX2-204ENST00000483851 TAS2R42Q7RTR8 314 aa26.09■■□□□ 1.77
SHOX2-204ENST00000483851 TERB1Q8NA31 727 aa26.09■■□□□ 1.77
SHOX2-204ENST00000483851 UCMAQ8WVF2 138 aa26.09■■□□□ 1.77
SHOX2-204ENST00000483851 KCNJ9Q92806 393 aa26.09■■□□□ 1.77
SHOX2-204ENST00000483851 DNAJC6O75061 913 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms