RNA–Protein interactions for RNA: ENST00000483768.1

ZNF561-216, Transcript of zinc finger protein 561, humanhuman

TSL 1 (best)

Gene ZNF561, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-216ENST00000483768 SLC25A23Q9BV35 468 aa3.32□□□□□ -1.88
ZNF561-216ENST00000483768 PTDSS2Q9BVG9 487 aa3.32□□□□□ -1.88
ZNF561-216ENST00000483768 STRA6Q9BX79 667 aa3.32□□□□□ -1.88
ZNF561-216ENST00000483768 HDHD5Q9BXW7 423 aa3.32□□□□□ -1.88
ZNF561-216ENST00000483768 MRPL1Q9BYD6 325 aaKnown RBP3.32□□□□□ -1.88
ZNF561-216ENST00000483768 TRIM7Q9C029 511 aa3.32□□□□□ -1.88
ZNF561-216ENST00000483768 ENKD1Q9H0I2 346 aa3.32□□□□□ -1.88
ZNF561-216ENST00000483768 HSD3B7Q9H2F3 369 aa3.32□□□□□ -1.88
ZNF561-216ENST00000483768 DPH5Q9H2P9 285 aa3.32□□□□□ -1.88
ZNF561-216ENST00000483768 DNAJC18Q9H819 358 aa3.32□□□□□ -1.88
ZNF561-216ENST00000483768 AGO3Q9H9G7 860 aaKnown RBP3.32□□□□□ -1.88
ZNF561-216ENST00000483768 MRPL44Q9H9J2 332 aaKnown RBP3.32□□□□□ -1.88
ZNF561-216ENST00000483768 ZBTB40Q9NUA8 1239 aa3.32□□□□□ -1.88
ZNF561-216ENST00000483768 AATFQ9NY61 560 aaKnown RBP eCLIP3.32□□□□□ -1.88
ZNF561-216ENST00000483768 MTMR4Q9NYA4 1195 aa3.32□□□□□ -1.88
ZNF561-216ENST00000483768 HECAQ9UBI9 543 aaPredicted RBP3.32□□□□□ -1.88
ZNF561-216ENST00000483768 CNOT8Q9UFF9 292 aaKnown RBP3.32□□□□□ -1.88
ZNF561-216ENST00000483768 IL19Q9UHD0 177 aa3.32□□□□□ -1.88
ZNF561-216ENST00000483768 SERTAD3Q9UJW9 196 aa3.32□□□□□ -1.88
ZNF561-216ENST00000483768 FZD1Q9UP38 647 aa3.32□□□□□ -1.88
ZNF561-216ENST00000483768 CHKBQ9Y259 395 aa3.32□□□□□ -1.88
ZNF561-216ENST00000483768 BTBD3Q9Y2F9 522 aa3.32□□□□□ -1.88
ZNF561-216ENST00000483768 COPG1Q9Y678 874 aaKnown RBP3.32□□□□□ -1.88
ZNF561-216ENST00000483768 ARFGEF2Q9Y6D5 1785 aa3.32□□□□□ -1.88
ZNF561-216ENST00000483768 KIF20BQ96Q89 1820 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 ZNF831Q5JPB2 1677 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 TONSLQ96HA7 1378 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 NPC1L1Q9UHC9 1359 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 A0A1W2PRX2 142 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 TCRBV21S2A2A0A5A6 115 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 TMEM110-MUSTN1A8MSY1 372 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 BOLA2-SMG1P6H3BVE0 249 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 PJA2O43164 708 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 PPIP5K2O43314 1243 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 SLC25A17O43808 307 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 PEX11AO75192 247 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 IPO7O95373 1038 aaKnown RBP3.31□□□□□ -1.88
ZNF561-216ENST00000483768 MMP2P08253 660 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 SPATA31D3P0C874 917 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 PDHBP11177 359 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 CYP4B1P13584 511 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 ZFXP17010 805 aaPredicted RBP3.31□□□□□ -1.88
ZNF561-216ENST00000483768 ITGALP20701 1170 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 EDN2P20800 178 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 PRPH2P23942 346 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 EPHA3P29320 983 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 CASP3P42574 277 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 MATR3P43243 847 aaKnown RBP eCLIP3.31□□□□□ -1.88
ZNF561-216ENST00000483768 PTPN9P43378 593 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 PSMC4P43686 418 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 MTNR1AP48039 350 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 HNMTP50135 292 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 GNAQP50148 359 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 RAB28P51157 221 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 ATXN3P54252 364 aaPredicted RBP3.31□□□□□ -1.88
ZNF561-216ENST00000483768 INHBCP55103 352 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 NPEPPSP55786 919 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 YPEL5P62699 121 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 TIAL1Q01085 375 aaKnown RBP eCLIP3.31□□□□□ -1.88
ZNF561-216ENST00000483768 SP2Q02086 613 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 HGFACQ04756 655 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 ZBTB16Q05516 673 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 CXCL9Q07325 125 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 PIGFQ07326 219 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 MRPL49Q13405 166 aaKnown RBP3.31□□□□□ -1.88
ZNF561-216ENST00000483768 TRA2AQ13595 282 aaKnown RBP eCLIP3.31□□□□□ -1.88
ZNF561-216ENST00000483768 RIN1Q13671 783 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 ALKBH1Q13686 389 aaKnown RBP3.31□□□□□ -1.88
ZNF561-216ENST00000483768 TAZQ16635 292 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 SMN1Q16637 294 aaKnown RBP3.31□□□□□ -1.88
ZNF561-216ENST00000483768 COL28A1Q2UY09 1125 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 MYLK3Q32MK0 819 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 AASDHQ4L235 1098 aaPredicted RBP3.31□□□□□ -1.88
ZNF561-216ENST00000483768 CEP55Q53EZ4 464 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 TTC39AQ5SRH9 613 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 CCDC183Q5T5S1 534 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 SLC9A4Q6AI14 798 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 JADE1Q6IE81 842 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 ETFRF1Q6IPR1 90 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 RGMBQ6NW40 437 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.31□□□□□ -1.88
ZNF561-216ENST00000483768 GLDNQ6ZMI3 551 aaPredicted RBP3.31□□□□□ -1.88
ZNF561-216ENST00000483768 SPATA31D4Q6ZUB0 917 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 MOB3CQ70IA8 216 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 KCTD9Q7L273 389 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 LPCAT2Q7L5N7 544 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 ADGRE4PQ86SQ3 457 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 TADA2BQ86TJ2 420 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 TMEM110Q86TL2 294 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 FAM83AQ86UY5 434 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 DHX40Q8IX18 779 aaKnown RBP3.31□□□□□ -1.88
ZNF561-216ENST00000483768 SIRT6Q8N6T7 355 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 NHLRC2Q8NBF2 726 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 ATAD1Q8NBU5 361 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 MCUQ8NE86 351 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 SUPT20HQ8NEM7 779 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 HASPINQ8TF76 798 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 TFAP2CQ92754 450 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 HDAC11Q96DB2 347 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 MARS2Q96GW9 593 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms