RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 PAPLNO95428 1278 aa13.18□□□□□ -0.3
CPNE1-225ENST00000483495 ESR1P03372 595 aa13.18□□□□□ -0.3
CPNE1-225ENST00000483495 ENO1P06733 434 aaKnown RBP13.18□□□□□ -0.3
CPNE1-225ENST00000483495 PYGLP06737 847 aa13.18□□□□□ -0.3
CPNE1-225ENST00000483495 TYRP14679 529 aa13.18□□□□□ -0.3
CPNE1-225ENST00000483495 HNF1BP35680 557 aa13.18□□□□□ -0.3
CPNE1-225ENST00000483495 ATP6V0D1P61421 351 aa13.18□□□□□ -0.3
CPNE1-225ENST00000483495 CTSL3PQ5NE16 218 aa13.18□□□□□ -0.3
CPNE1-225ENST00000483495 ELMSAN1Q6PJG2 1045 aa13.18□□□□□ -0.3
CPNE1-225ENST00000483495 PAQR3Q6TCH7 311 aa13.18□□□□□ -0.3
CPNE1-225ENST00000483495 FRMD7Q6ZUT3 714 aa13.18□□□□□ -0.3
CPNE1-225ENST00000483495 ZSWIM9Q86XI8 627 aa13.18□□□□□ -0.3
CPNE1-225ENST00000483495 ADGRG2Q8IZP9 1017 aa13.18□□□□□ -0.3
CPNE1-225ENST00000483495 KIAA1958Q8N8K9 716 aa13.18□□□□□ -0.3
CPNE1-225ENST00000483495 KCNJ9Q92806 393 aa13.18□□□□□ -0.3
CPNE1-225ENST00000483495 KIAA1191Q96A73 305 aa13.18□□□□□ -0.3
CPNE1-225ENST00000483495 SAMD11Q96NU1 681 aa13.18□□□□□ -0.3
CPNE1-225ENST00000483495 ATOH8Q96SQ7 321 aa13.18□□□□□ -0.3
CPNE1-225ENST00000483495 P2RY12Q9H244 342 aa13.18□□□□□ -0.3
CPNE1-225ENST00000483495 TCF7L2Q9NQB0 619 aa13.18□□□□□ -0.3
CPNE1-225ENST00000483495 SLC25A13Q9UJS0 675 aa13.18□□□□□ -0.3
CPNE1-225ENST00000483495 DOCK6Q96HP0 2047 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 LAMA2P24043 3122 aaKnown RBP13.17□□□□□ -0.3
CPNE1-225ENST00000483495 GYG2O15488 501 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 GSC2O15499 205 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 OR1I1O60431 355 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 SMIM24O75264 130 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 VPS26AO75436 327 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 WFS1O76024 890 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 TPBGLP0DKB5 382 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 MTHFD2P13995 350 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 WEE1P30291 646 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 ECT2LQ008S8 904 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 RAD51Q06609 339 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 OR4D1Q15615 310 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 LY6G5CQ5SRR4 150 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 ADIPOR2Q86V24 386 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 TMPRSS6Q8IU80 811 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 PLPP6Q8IY26 295 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 KIRREL3Q8IZU9 778 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 CBARPQ8N350 705 aaPredicted RBP13.17□□□□□ -0.3
CPNE1-225ENST00000483495 NKAPQ8N5F7 415 aaKnown RBP13.17□□□□□ -0.3
CPNE1-225ENST00000483495 TEX9Q8N6V9 391 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 FAM13CQ8NE31 585 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 AGR3Q8TD06 166 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 MAGEC3Q8TD91 643 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.17□□□□□ -0.3
CPNE1-225ENST00000483495 GPR21Q99679 349 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 CCDC28BQ9BUN5 200 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 SLC2A11Q9BYW1 496 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 C1orf21Q9H246 121 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 MMADHCQ9H3L0 296 aaPredicted RBP13.17□□□□□ -0.3
CPNE1-225ENST00000483495 GSTO2Q9H4Y5 243 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 EML4Q9HC35 981 aaKnown RBP13.17□□□□□ -0.3
CPNE1-225ENST00000483495 CYP4F12Q9HCS2 524 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 HECAQ9UBI9 543 aaPredicted RBP13.17□□□□□ -0.3
CPNE1-225ENST00000483495 FAM50BQ9Y247 325 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 HCFC2Q9Y5Z7 792 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 SLC30A1Q9Y6M5 507 aa13.17□□□□□ -0.3
CPNE1-225ENST00000483495 TRBV5-4A0A0C4DH59 114 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 C1orf232A0A0U1RR37 186 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 A8MUI8 341 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 SPECC1L-ADORA2AF8WAN1 911 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 SLC9A3R1O14745 358 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-225ENST00000483495 KERAO60938 352 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 POP4O95707 220 aaKnown RBP13.16□□□□□ -0.3
CPNE1-225ENST00000483495 BMP1P13497 986 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 CEBPBP17676 345 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 PRDX6P30041 224 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 PTPN5P54829 565 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 HERVK_113P63132 956 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 CARD16Q5EG05 197 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 ZNF678Q5SXM1 525 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 PHF21BQ96EK2 531 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 MAELQ96JY0 434 aaKnown RBP13.16□□□□□ -0.3
CPNE1-225ENST00000483495 FAR2Q96K12 515 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 ZNF641Q96N77 438 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-225ENST00000483495 OR52B2Q96RD2 323 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 MCCC1Q96RQ3 725 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-225ENST00000483495 ERVK-6Q9BXR3 956 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 SUV39H2Q9H5I1 410 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.16□□□□□ -0.37e-7■■□□□ 11.4
CPNE1-225ENST00000483495 APPL1Q9UKG1 709 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 PCDHB1Q9Y5F3 818 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 B2RBV5 119 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 WASH3PC4AMC7 463 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 PER2O15055 1255 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 CLDN7O95471 211 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 TSPAN12O95859 305 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 CA3P07451 260 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 HNRNPLP14866 589 aaKnown RBP eCLIP13.16□□□□□ -0.32e-8■□□□□ 10.1
CPNE1-225ENST00000483495 RPS3P23396 243 aaKnown RBP eCLIP13.16□□□□□ -0.32e-11■■■■□ 19.3
CPNE1-225ENST00000483495 CCNHP51946 323 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-225ENST00000483495 ERVK-21P61565 698 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 LSM12Q3MHD2 195 aaKnown RBP13.16□□□□□ -0.3
CPNE1-225ENST00000483495 UNC50Q53HI1 259 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 SH2D4BQ5SQS7 431 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 ZNF697Q5TEC3 545 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 TAS2R42Q7RTR8 314 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 SNX20Q7Z614 316 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms