RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 ARSDP51689 593 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 THOP1P52888 689 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 PFN3P60673 137 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 GLE1Q53GS7 698 aaKnown RBP17.73■□□□□ 0.43
CPNE1-224ENST00000483359 TSTD2Q5T7W7 516 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 PDIK1LQ8N165 341 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 FBXO25Q8TCJ0 367 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 STYXQ8WUJ0 223 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 FUBP1Q96AE4 644 aaKnown RBP17.73■□□□□ 0.43
CPNE1-224ENST00000483359 MFSD3Q96ES6 412 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 TBATAQ96M53 351 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 ZSCAN5AQ9BUG6 496 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 APOOQ9BUR5 198 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 CAAP1Q9H8G2 361 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 RAD18Q9NS91 495 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 NLE1Q9NVX2 485 aaPredicted RBP17.73■□□□□ 0.43
CPNE1-224ENST00000483359 ADAMTS9Q9P2N4 1935 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 RALGAPA1Q6GYQ0 2036 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 OR51F1A6NGY5 319 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 SDR42E2A6NKP2 422 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 PROB1E7EW31 1015 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 TLR4O00206 839 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 GAPDHSO14556 408 aaPredicted RBP17.73■□□□□ 0.43
CPNE1-224ENST00000483359 PPFIA2O75334 1257 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 MC4RP32245 332 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 HADHAP40939 763 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 CDK3Q00526 305 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 SF3A2Q15428 464 aaKnown RBP17.73■□□□□ 0.43
CPNE1-224ENST00000483359 CHRNA6Q15825 494 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 KIF19Q2TAC6 998 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 ATP13A5Q4VNC0 1218 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 PLA2G2CQ5R387 149 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 PRAMEF14Q5SWL7 426 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 DOK6Q6PKX4 331 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 ZDHHC24Q6UX98 284 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 RABEPKQ7Z6M1 372 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 RAVER1Q8IY67 606 aaKnown RBP17.73■□□□□ 0.43
CPNE1-224ENST00000483359 TRAM1L1Q8N609 369 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 CEP76Q8TAP6 659 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 IFT81Q8WYA0 676 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 ANKRD6Q9Y2G4 727 aa17.73■□□□□ 0.43
CPNE1-224ENST00000483359 PI4KAP42356 2102 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 SMAPO00193 183 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 NDC80O14777 642 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 VILLO15195 856 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 UGT1A9O60656 530 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 PRSS56P0CW18 603 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 UGT1A6P19224 532 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 UGT1A1P22309 533 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 UGT1A4P22310 534 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 UGT1A3P35503 534 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 UGT1A5P35504 534 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 ARL4CP56559 192 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 IRX4P78413 519 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 GRIK2Q13002 908 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 PEX6Q13608 980 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 SKIDA1Q1XH10 827 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 ZDHHC20Q5W0Z9 365 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 SLC23A3Q6PIS1 610 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 ART4Q93070 314 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 SIGLEC10Q96LC7 697 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 NUSAP1Q9BXS6 441 aaKnown RBP17.72■□□□□ 0.43
CPNE1-224ENST00000483359 CDH19Q9H159 772 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 FAM96AQ9H5X1 160 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 UGT1A7Q9HAW7 530 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 UGT1A10Q9HAW8 530 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 UGT1A8Q9HAW9 530 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 NFKBIL1Q9UBC1 381 aaPredicted RBP17.72■□□□□ 0.43
CPNE1-224ENST00000483359 SOX13Q9UN79 622 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 SNX11Q9Y5W9 270 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 OTOGLQ3ZCN5 2332 aa17.72■□□□□ 0.43
CPNE1-224ENST00000483359 ZFHX2Q9C0A1 2572 aaPredicted RBP17.72■□□□□ 0.43
CPNE1-224ENST00000483359 CACNB4O00305 520 aaPredicted RBP17.71■□□□□ 0.43
CPNE1-224ENST00000483359 KHNYNO15037 678 aaKnown RBP17.71■□□□□ 0.43
CPNE1-224ENST00000483359 SRP72O76094 671 aaKnown RBP17.71■□□□□ 0.43
CPNE1-224ENST00000483359 CA5AP35218 305 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 TRIM23P36406 574 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 XIAPP98170 497 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 BNC1Q01954 994 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 LAMB3Q13751 1172 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 ZNF542PQ5EBM4 170 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 DNAJC21Q5F1R6 531 aaKnown RBP17.71■□□□□ 0.43
CPNE1-224ENST00000483359 IQCHQ86VS3 1027 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 SPATS2Q86XZ4 545 aaKnown RBP17.71■□□□□ 0.43
CPNE1-224ENST00000483359 OR2I1PQ8NGU4 316 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 RUBCNQ92622 972 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 HDAC10Q969S8 669 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 SKA1Q96BD8 255 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 ZNF669Q96BR6 464 aaPredicted RBP17.71■□□□□ 0.43
CPNE1-224ENST00000483359 STAMBPL1Q96FJ0 436 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 CDKN2AIPNLQ96HQ2 116 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 KIFC1Q9BW19 673 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 GTPBP2Q9BX10 602 aaKnown RBP17.71■□□□□ 0.43
CPNE1-224ENST00000483359 ASB8Q9H765 288 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 CAPN10Q9HC96 672 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 SEMA4GQ9NTN9 838 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 IL1RAPL1Q9NZN1 696 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 SLC6A14Q9UN76 642 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 CHMP2BQ9UQN3 213 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 TMEM131Q92545 1883 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms