RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 PEX26Q7Z412 305 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 UBL4BQ8N7F7 174 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 LRRC57Q8N9N7 239 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 GPR156Q8NFN8 814 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 GPBAR1Q8TDU6 330 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 GRAMD1AQ96CP6 724 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 AGAP2Q99490 1192 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 DESI2Q9BSY9 194 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 GPR63Q9BZJ6 419 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 CDH19Q9H159 772 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 DPEP2Q9H4A9 486 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 SYNDIG1Q9H7V2 258 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 MAGEE1Q9HCI5 957 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 UBP1Q9NZI7 540 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 TRHDEQ9UKU6 1024 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 MYLKQ15746 1914 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 MIF4GDA9UHW6 222 aaKnown RBP13.8□□□□□ -0.2
VARS-225ENST00000482996 INPP4BO15327 924 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 TJP3O95049 919 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 ASMTLO95671 621 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 PTMAP06454 111 aaKnown RBP13.8□□□□□ -0.2
VARS-225ENST00000482996 PIRTP0C851 137 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 CD68P34810 354 aaPredicted RBP13.8□□□□□ -0.2
VARS-225ENST00000482996 ADCY8P40145 1251 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 POLD2P49005 469 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 WNT3AP56704 352 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 SPIDRQ14159 915 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 NOMO1Q15155 1222 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 C14orf28Q4W4Y0 310 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 HENMT1Q5T8I9 393 aaKnown RBP13.8□□□□□ -0.2
VARS-225ENST00000482996 TRIM74Q86UV6 250 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 GALNT13Q8IUC8 556 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 CDKL3Q8IVW4 592 aaPredicted RBP13.8□□□□□ -0.2
VARS-225ENST00000482996 ZNF567Q8N184 647 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 CCL4L1Q8NHW4 92 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 ACTL9Q8TC94 416 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 CCDC74AQ96AQ1 378 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 SCARF2Q96GP6 870 aaPredicted RBP13.8□□□□□ -0.2
VARS-225ENST00000482996 COX14Q96I36 57 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 OR2M4Q96R27 311 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 FCRL5Q96RD9 977 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 RSPH14Q9UHP6 348 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 SHOC2Q9UQ13 582 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 RAXQ9Y2V3 346 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 TMEM98Q9Y2Y6 226 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 ZNF711Q9Y462 761 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 GPSM3Q9Y4H4 160 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 PCDHB1Q9Y5F3 818 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 WDFY3Q8IZQ1 3526 aa13.8□□□□□ -0.2
VARS-225ENST00000482996 FAM208BQ5VWN6 2430 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 GOLGA6L9A6NEM1 432 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 NOBOXO60393 691 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 USP12O75317 370 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 ZNF189O75820 626 aaPredicted RBP13.79□□□□□ -0.2
VARS-225ENST00000482996 STK10O94804 968 aaKnown RBP13.79□□□□□ -0.2
VARS-225ENST00000482996 EPOP01588 193 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 SLC4A1P02730 911 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 FUCA1P04066 466 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 GLB1P16278 677 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 RBL1P28749 1068 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 EIF3EP60228 445 aaKnown RBP13.79□□□□□ -0.2
VARS-225ENST00000482996 CTBSQ01459 385 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 OTUD4Q01804 1114 aaKnown RBP13.79□□□□□ -0.2
VARS-225ENST00000482996 MPP3Q13368 585 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 ISXQ2M1V0 245 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 ZNF569Q5MCW4 686 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 CERCAMQ5T4B2 595 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 ITPRIPL1Q6GPH6 555 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 SLC30A9Q6PML9 568 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 KDELC1Q6UW63 502 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 MARK2Q7KZI7 788 aaKnown RBP13.79□□□□□ -0.2
VARS-225ENST00000482996 TMC3Q7Z5M5 1100 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 ZDHHC1Q8WTX9 485 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 ALG3Q92685 438 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 WDR24Q96S15 920 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 ZSCAN5AQ9BUG6 496 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 SPATA16Q9BXB7 569 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 TAAR2Q9P1P5 351 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 VPS18Q9P253 973 aa13.79□□□□□ -0.2
VARS-225ENST00000482996 ARHGEF17Q96PE2 2063 aaPredicted RBP13.78□□□□□ -0.2
VARS-225ENST00000482996 ZFYVE26Q68DK2 2539 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 LOC285095A0A1B0GVY8 99 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 F5H423 210 aaPredicted RBP13.78□□□□□ -0.2
VARS-225ENST00000482996 RBP3P10745 1247 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 PYGMP11217 842 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 PNLIPP16233 465 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 AK4P27144 223 aaPredicted RBP13.78□□□□□ -0.2
VARS-225ENST00000482996 ACTN2P35609 894 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 ACTR1BP42025 376 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 DCDC1P59894 354 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 ACTR1AP61163 376 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 BIRC2Q13490 618 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 LRP8Q14114 963 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 HLTFQ14527 1009 aaKnown RBP eCLIP13.78□□□□□ -0.2
VARS-225ENST00000482996 PYCR3Q53H96 274 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 ALS2CLQ60I27 953 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 PDPK2PQ6A1A2 396 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 DARS2Q6PI48 645 aaKnown RBP13.78□□□□□ -0.2
VARS-225ENST00000482996 NRROSQ86YC3 692 aa13.78□□□□□ -0.2
VARS-225ENST00000482996 LSMEM2Q8N112 164 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms