RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 SNX12Q9UMY4 172 aa16.25■□□□□ 0.19
CCDC78-212ENST00000482152 SPO11Q9Y5K1 396 aa16.25■□□□□ 0.19
CCDC78-212ENST00000482152 DCHS1Q96JQ0 3298 aa16.25■□□□□ 0.19
CCDC78-212ENST00000482152 TMEM131Q92545 1883 aa16.25■□□□□ 0.19
CCDC78-212ENST00000482152 LRRK1Q38SD2 2015 aa16.24■□□□□ 0.19
CCDC78-212ENST00000482152 SPAARA0A1B0GVQ0 90 aa16.24■□□□□ 0.19
CCDC78-212ENST00000482152 PRSS38A1L453 326 aa16.24■□□□□ 0.19
CCDC78-212ENST00000482152 GPR89AB7ZAQ6 455 aa16.24■□□□□ 0.19
CCDC78-212ENST00000482152 F5H423 210 aaPredicted RBP16.24■□□□□ 0.19
CCDC78-212ENST00000482152 PGRMC1O00264 195 aaKnown RBP16.24■□□□□ 0.19
CCDC78-212ENST00000482152 IFNB1P01574 187 aa16.24■□□□□ 0.19
CCDC78-212ENST00000482152 ATP1A1P05023 1023 aaKnown RBP16.24■□□□□ 0.19
CCDC78-212ENST00000482152 CEACAM5P06731 702 aa16.24■□□□□ 0.19
CCDC78-212ENST00000482152 GPR89BP0CG08 455 aa16.24■□□□□ 0.19
CCDC78-212ENST00000482152 CHRNA4P43681 627 aa16.24■□□□□ 0.19
CCDC78-212ENST00000482152 RPIAP49247 311 aa16.24■□□□□ 0.19
CCDC78-212ENST00000482152 LAMB3Q13751 1172 aa16.24■□□□□ 0.19
CCDC78-212ENST00000482152 GSTA5Q7RTV2 222 aa16.24■□□□□ 0.19
CCDC78-212ENST00000482152 TTC30BQ8N4P2 665 aa16.24■□□□□ 0.19
CCDC78-212ENST00000482152 GPR26Q8NDV2 337 aa16.24■□□□□ 0.19
CCDC78-212ENST00000482152 BLOC1S5Q8TDH9 187 aa16.24■□□□□ 0.19
CCDC78-212ENST00000482152 OR1E3Q8WZA6 343 aa16.24■□□□□ 0.19
CCDC78-212ENST00000482152 LRRC61Q9BV99 259 aa16.24■□□□□ 0.19
CCDC78-212ENST00000482152 SPATA16Q9BXB7 569 aa16.24■□□□□ 0.19
CCDC78-212ENST00000482152 TRNAU1APQ9NX07 287 aaKnown RBP16.24■□□□□ 0.19
CCDC78-212ENST00000482152 VPS18Q9P253 973 aa16.24■□□□□ 0.19
CCDC78-212ENST00000482152 PNMA8BQ9ULN7 279 aaPredicted RBP16.24■□□□□ 0.19
CCDC78-212ENST00000482152 DOLKQ9UPQ8 538 aa16.24■□□□□ 0.19
CCDC78-212ENST00000482152 KNL1Q8NG31 2342 aa16.24■□□□□ 0.19
CCDC78-212ENST00000482152 COL5A1P20908 1838 aaPredicted RBP16.24■□□□□ 0.19
CCDC78-212ENST00000482152 AP3B1O00203 1094 aa16.23■□□□□ 0.19
CCDC78-212ENST00000482152 TRIM38O00635 465 aa16.23■□□□□ 0.19
CCDC78-212ENST00000482152 SIGLEC6O43699 453 aa16.23■□□□□ 0.19
CCDC78-212ENST00000482152 DKK1O94907 266 aa16.23■□□□□ 0.19
CCDC78-212ENST00000482152 GAS8O95995 478 aa16.23■□□□□ 0.19
CCDC78-212ENST00000482152 FTH1P19P0C7X4 201 aa16.23■□□□□ 0.19
CCDC78-212ENST00000482152 GIMD1P0DJR0 217 aa16.23■□□□□ 0.19
CCDC78-212ENST00000482152 BPIP17213 487 aa16.23■□□□□ 0.19
CCDC78-212ENST00000482152 LPOP22079 712 aaPredicted RBP16.23■□□□□ 0.19
CCDC78-212ENST00000482152 ACP1P24666 158 aa16.23■□□□□ 0.19
CCDC78-212ENST00000482152 GNG11P61952 73 aa16.23■□□□□ 0.19
CCDC78-212ENST00000482152 PROX2Q3B8N5 592 aa16.23■□□□□ 0.19
CCDC78-212ENST00000482152 DENND5AQ6IQ26 1287 aa16.23■□□□□ 0.19
CCDC78-212ENST00000482152 RD3Q7Z3Z2 195 aa16.23■□□□□ 0.19
CCDC78-212ENST00000482152 PDCD7Q8N8D1 485 aaKnown RBP16.23■□□□□ 0.19
CCDC78-212ENST00000482152 PRELID2Q8N945 189 aa16.23■□□□□ 0.19
CCDC78-212ENST00000482152 VPS35Q96QK1 796 aa16.23■□□□□ 0.19
CCDC78-212ENST00000482152 CYP4F12Q9HCS2 524 aa16.23■□□□□ 0.19
CCDC78-212ENST00000482152 FGF22Q9HCT0 170 aa16.23■□□□□ 0.19
CCDC78-212ENST00000482152 CNOT6Q9ULM6 557 aaKnown RBP16.23■□□□□ 0.19
CCDC78-212ENST00000482152 PYCARDQ9ULZ3 195 aa16.23■□□□□ 0.19
CCDC78-212ENST00000482152 GOLGA6L10A0A0M3HER8 536 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 USP27XA6NNY8 438 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 E7EVH7 732 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 AURKAO14965 403 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 YY2O15391 372 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 STX7O15400 261 aaKnown RBP16.22■□□□□ 0.19
CCDC78-212ENST00000482152 FFAR2O15552 330 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 SUN1O94901 812 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 CKMT1AP12532 417 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 SPAM1P38567 509 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 HADHAP40939 763 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 LMAN1P49257 510 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 MSLNQ13421 630 aaPredicted RBP16.22■□□□□ 0.19
CCDC78-212ENST00000482152 SEMA5AQ13591 1074 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 CYP1B1Q16678 543 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 PAPD7Q5XG87 772 aaKnown RBP16.22■□□□□ 0.19
CCDC78-212ENST00000482152 RBFAQ8N0V3 343 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 ADAMTS14Q8WXS8 1223 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 AGAP2Q99490 1192 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 BOCQ9BWV1 1114 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 CLPBQ9H078 707 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 TCEAL2Q9H3H9 227 aaPredicted RBP16.22■□□□□ 0.19
CCDC78-212ENST00000482152 ETNK1Q9HBU6 452 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 TRIM39Q9HCM9 518 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 MOSPD1Q9UJG1 213 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 APPL1Q9UKG1 709 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 CABIN1Q9Y6J0 2220 aa16.22■□□□□ 0.19
CCDC78-212ENST00000482152 PCNX2A6NKB5 2137 aa16.21■□□□□ 0.19
CCDC78-212ENST00000482152 FADS2P1A8MWK0 482 aa16.21■□□□□ 0.19
CCDC78-212ENST00000482152 VEGFDO43915 354 aa16.21■□□□□ 0.19
CCDC78-212ENST00000482152 SLC25A14O95258 325 aaPredicted RBP16.21■□□□□ 0.19
CCDC78-212ENST00000482152 SLC4A1P02730 911 aa16.21■□□□□ 0.19
CCDC78-212ENST00000482152 GP1BAP07359 652 aa16.21■□□□□ 0.19
CCDC78-212ENST00000482152 PMLP29590 882 aa16.21■□□□□ 0.19
CCDC78-212ENST00000482152 RPL22P35268 128 aaKnown RBP16.21■□□□□ 0.19
CCDC78-212ENST00000482152 SHC2P98077 582 aa16.21■□□□□ 0.19
CCDC78-212ENST00000482152 CDK16Q00536 496 aa16.21■□□□□ 0.19
CCDC78-212ENST00000482152 E2F1Q01094 437 aa16.21■□□□□ 0.19
CCDC78-212ENST00000482152 ILF3Q12906 894 aaKnown RBP eCLIP16.21■□□□□ 0.19
CCDC78-212ENST00000482152 C1orf61Q13536 156 aa16.21■□□□□ 0.19
CCDC78-212ENST00000482152 ITGA9Q13797 1035 aa16.21■□□□□ 0.19
CCDC78-212ENST00000482152 LRP8Q14114 963 aa16.21■□□□□ 0.19
CCDC78-212ENST00000482152 C6orf132Q5T0Z8 1188 aa16.21■□□□□ 0.19
CCDC78-212ENST00000482152 PHYKPLQ8IUZ5 450 aa16.21■□□□□ 0.19
CCDC78-212ENST00000482152 OR6C4Q8NGE1 309 aa16.21■□□□□ 0.19
CCDC78-212ENST00000482152 GPBAR1Q8TDU6 330 aa16.21■□□□□ 0.19
CCDC78-212ENST00000482152 GLYATL1Q969I3 302 aa16.21■□□□□ 0.19
CCDC78-212ENST00000482152 MAGOHBQ96A72 148 aaKnown RBP16.21■□□□□ 0.19
CCDC78-212ENST00000482152 PDXPQ96GD0 296 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms