RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 GPC6Q9Y625 555 aaPredicted RBP16.77■□□□□ 0.28
SH3D21-203ENST00000480549 LATS1O95835 1130 aa16.77■□□□□ 0.28
SH3D21-203ENST00000480549 ATP5BP06576 529 aaKnown RBP16.77■□□□□ 0.28
SH3D21-203ENST00000480549 CLCN5P51795 746 aa16.77■□□□□ 0.28
SH3D21-203ENST00000480549 TRIP10Q15642 601 aa16.77■□□□□ 0.28
SH3D21-203ENST00000480549 TRMT5Q32P41 509 aaKnown RBP16.77■□□□□ 0.28
SH3D21-203ENST00000480549 FSCBQ5H9T9 825 aa16.77■□□□□ 0.28
SH3D21-203ENST00000480549 METTL21CQ5VZV1 264 aa16.77■□□□□ 0.28
SH3D21-203ENST00000480549 LDB1Q86U70 411 aaPredicted RBP16.77■□□□□ 0.28
SH3D21-203ENST00000480549 CROCCP3Q8IVE0 287 aa16.77■□□□□ 0.28
SH3D21-203ENST00000480549 SPNS2Q8IVW8 549 aa16.77■□□□□ 0.28
SH3D21-203ENST00000480549 SPATA6LQ8N4H0 392 aa16.77■□□□□ 0.28
SH3D21-203ENST00000480549 BRSK1Q8TDC3 778 aa16.77■□□□□ 0.28
SH3D21-203ENST00000480549 TBATAQ96M53 351 aa16.77■□□□□ 0.28
SH3D21-203ENST00000480549 TSNARE1Q96NA8 513 aa16.77■□□□□ 0.28
SH3D21-203ENST00000480549 STN1Q9H668 368 aaKnown RBP16.77■□□□□ 0.28
SH3D21-203ENST00000480549 ATAD3AQ9NVI7 634 aa16.77■□□□□ 0.28
SH3D21-203ENST00000480549 XPR1Q9UBH6 696 aa16.77■□□□□ 0.28
SH3D21-203ENST00000480549 SLC7A8Q9UHI5 535 aa16.77■□□□□ 0.28
SH3D21-203ENST00000480549 A0A087X1B8 175 aa16.77■□□□□ 0.27
SH3D21-203ENST00000480549 CBX4O00257 560 aa16.77■□□□□ 0.27
SH3D21-203ENST00000480549 INSIG1O15503 277 aa16.77■□□□□ 0.27
SH3D21-203ENST00000480549 H2AFYO75367 372 aaKnown RBP16.77■□□□□ 0.27
SH3D21-203ENST00000480549 S1PR4O95977 384 aa16.77■□□□□ 0.27
SH3D21-203ENST00000480549 PIRTP0C851 137 aa16.77■□□□□ 0.27
SH3D21-203ENST00000480549 PMLP29590 882 aa16.77■□□□□ 0.27
SH3D21-203ENST00000480549 KDSRQ06136 332 aa16.77■□□□□ 0.27
SH3D21-203ENST00000480549 TXNDC8Q6A555 127 aa16.77■□□□□ 0.27
SH3D21-203ENST00000480549 Q6ZNB5 142 aa16.77■□□□□ 0.27
SH3D21-203ENST00000480549 GPR65Q8IYL9 337 aa16.77■□□□□ 0.27
SH3D21-203ENST00000480549 ULK2Q8IYT8 1036 aa16.77■□□□□ 0.27
SH3D21-203ENST00000480549 TMCO5AQ8N6Q1 288 aa16.77■□□□□ 0.27
SH3D21-203ENST00000480549 ARL14EPQ8N8R7 260 aaPredicted RBP16.77■□□□□ 0.27
SH3D21-203ENST00000480549 OR6P1Q8NGX9 317 aa16.77■□□□□ 0.27
SH3D21-203ENST00000480549 PLGRKTQ9HBL7 147 aa16.77■□□□□ 0.27
SH3D21-203ENST00000480549 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.77■□□□□ 0.27
SH3D21-203ENST00000480549 TRNAU1APQ9NX07 287 aaKnown RBP16.77■□□□□ 0.27
SH3D21-203ENST00000480549 ZDHHC7Q9NXF8 308 aa16.77■□□□□ 0.27
SH3D21-203ENST00000480549 CARNS1A5YM72 827 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 PPM1AP35813 382 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 PRAMEP78395 509 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 LIPMQ5VYY2 423 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 ZNF781Q8N8C0 355 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 RBM15BQ8NDT2 890 aaKnown RBP16.76■□□□□ 0.27
SH3D21-203ENST00000480549 GABPB2Q8TAK5 448 aaPredicted RBP16.76■□□□□ 0.27
SH3D21-203ENST00000480549 MOCOSQ96EN8 888 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 VPS50Q96JG6 964 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 SCYL1Q96KG9 808 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 CCDC106Q9BWC9 280 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 IGSF5Q9NSI5 407 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 DNAJC28Q9NX36 388 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 ADAMTS6Q9UKP5 1117 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 FGF18O76093 207 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 C1RP00736 705 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 PRLP01236 227 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 SERPINA6P08185 405 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 CNPP09543 421 aaKnown RBP16.76■□□□□ 0.27
SH3D21-203ENST00000480549 PIM1P11309 404 aaPredicted RBP16.76■□□□□ 0.27
SH3D21-203ENST00000480549 RAG1P15918 1043 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 CAMK2BQ13554 666 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 ADRM1Q16186 407 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 RNF135Q8IUD6 432 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 OR13C4Q8NGS5 318 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 SLC26A7Q8TE54 656 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 ARMC5Q96C12 935 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 PRPF18Q99633 342 aaKnown RBP16.76■□□□□ 0.27
SH3D21-203ENST00000480549 TDRD1Q9BXT4 1180 aaKnown RBP16.76■□□□□ 0.27
SH3D21-203ENST00000480549 MUC3BQ9H195 1237 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 AK5Q9Y6K8 562 aa16.76■□□□□ 0.27
SH3D21-203ENST00000480549 TGM5O43548 720 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 FOXD2O60548 495 aaPredicted RBP16.75■□□□□ 0.27
SH3D21-203ENST00000480549 TBL1XO60907 577 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 ZMPSTE24O75844 475 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 WISP3O95389 354 aaPredicted RBP16.75■□□□□ 0.27
SH3D21-203ENST00000480549 OCM2P0CE71 109 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 OCMP0CE72 109 aaPredicted RBP16.75■□□□□ 0.27
SH3D21-203ENST00000480549 IDH3AP50213 366 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 ZNF783Q6ZMS7 281 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 OTOP2Q7RTS6 562 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 ITIH5Q86UX2 942 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 HEXDCQ8WVB3 486 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 RILPQ96NA2 401 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 RIMKLBQ9ULI2 386 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 ITM2BQ9Y287 266 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 SNAP91O60641 907 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 BAIAP3O94812 1187 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 GOT2P00505 430 aaKnown RBP16.75■□□□□ 0.27
SH3D21-203ENST00000480549 CD300CQ08708 224 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 HECTD2Q5U5R9 776 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 ICA1LQ8NDH6 482 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 UNKQ9C0B0 810 aaKnown RBP16.75■□□□□ 0.27
SH3D21-203ENST00000480549 SCUBE2Q9NQ36 999 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 ACSS2Q9NR19 701 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 CPQQ9Y646 472 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 CCDC162PA2VCL2 907 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 SPECC1L-ADORA2AF8WAN1 911 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 DLX3O60479 287 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 MAGEC1O60732 1142 aa16.75■□□□□ 0.27
SH3D21-203ENST00000480549 RPP40O75818 363 aaKnown RBP16.75■□□□□ 0.27
SH3D21-203ENST00000480549 HSPA4LO95757 839 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms