RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 CTBSQ01459 385 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 ADCY2Q08462 1091 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 LLGL1Q15334 1064 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 COL28A1Q2UY09 1125 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 BBS12Q6ZW61 710 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 B4GALNT4Q76KP1 1039 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 LYSMD3Q7Z3D4 306 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 C17orf82Q86X59 251 aaPredicted RBP14.93□□□□□ -0.02
TDP2-205ENST00000480495 GAS2L3Q86XJ1 694 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 CCNJLQ8IV13 435 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 SPATA22Q8NHS9 363 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 ZDHHC1Q8WTX9 485 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 KRT35Q92764 455 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 WDR24Q96S15 920 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 LRRN3Q9H3W5 708 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 ZFYVE1Q9HBF4 777 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 SPATS2LQ9NUQ6 558 aaKnown RBP14.93□□□□□ -0.02
TDP2-205ENST00000480495 TAAR2Q9P1P5 351 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 VPS18Q9P253 973 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 LRIT1Q9P2V4 623 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 EFR3BQ9Y2G0 817 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 TMEM98Q9Y2Y6 226 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 PCDHGA8Q9Y5G5 932 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 PCDHA3Q9Y5H8 950 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 ZFHX4Q86UP3 3567 aa14.93□□□□□ -0.02
TDP2-205ENST00000480495 CCDC187A0A096LP49 1063 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 D6RAR5 112 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 INPP4BO15327 924 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 ZW10O43264 779 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 MT-CYBP00156 380 aaPredicted RBP14.92□□□□□ -0.02
TDP2-205ENST00000480495 RPLP0P05388 317 aaKnown RBP14.92□□□□□ -0.02
TDP2-205ENST00000480495 AK4P27144 223 aaPredicted RBP14.92□□□□□ -0.02
TDP2-205ENST00000480495 MLLT3P42568 568 aaPredicted RBP14.92□□□□□ -0.02
TDP2-205ENST00000480495 ABCG1P45844 678 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 NAP1L1P55209 391 aaKnown RBP14.92□□□□□ -0.02
TDP2-205ENST00000480495 WASHC5Q12768 1159 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 XRCC4Q13426 336 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 LRP8Q14114 963 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 PCSK7Q16549 785 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 PYCR3Q53H96 274 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 C3orf38Q5JPI3 329 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 SLC30A9Q6PML9 568 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 RAD9BQ6WBX8 426 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 KDELC2Q7Z4H8 507 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 TMC3Q7Z5M5 1100 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 TRIM74Q86UV6 250 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 ZC3H18Q86VM9 953 aaKnown RBP14.92□□□□□ -0.02
TDP2-205ENST00000480495 GALNT13Q8IUC8 556 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 WDR36Q8NI36 951 aaKnown RBP14.92□□□□□ -0.02
TDP2-205ENST00000480495 PTCD2Q8WV60 388 aaKnown RBP14.92□□□□□ -0.02
TDP2-205ENST00000480495 LIN37Q96GY3 246 aaPredicted RBP14.92□□□□□ -0.02
TDP2-205ENST00000480495 TMEM74Q96NL1 305 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 QKIQ96PU8 341 aaKnown RBP eCLIP14.92□□□□□ -0.02
TDP2-205ENST00000480495 STRADBQ9C0K7 418 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 RMI1Q9H9A7 625 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 THSD1Q9NS62 852 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 NFKBIL1Q9UBC1 381 aaPredicted RBP14.92□□□□□ -0.02
TDP2-205ENST00000480495 FAM153AQ9UHL3 310 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 CNOT6Q9ULM6 557 aaKnown RBP14.92□□□□□ -0.02
TDP2-205ENST00000480495 SATB2Q9UPW6 733 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 REXO2Q9Y3B8 237 aaKnown RBP14.92□□□□□ -0.02
TDP2-205ENST00000480495 RNF215Q9Y6U7 377 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 FAM208BQ5VWN6 2430 aa14.92□□□□□ -0.02
TDP2-205ENST00000480495 A0A1W2PQM1 296 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 CCDC66A2RUB6 948 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 APOC4-APOC2K7ER74 178 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 PJA2O43164 708 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 PMPCBO75439 489 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 ASMTLO95671 621 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 APOC2P02655 101 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 CTNNA2P26232 953 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 RBMS1P29558 406 aaKnown RBP14.91□□□□□ -0.02
TDP2-205ENST00000480495 CD68P34810 354 aaPredicted RBP14.91□□□□□ -0.02
TDP2-205ENST00000480495 CETN2P41208 172 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 TNNT3P45378 269 aaPredicted RBP14.91□□□□□ -0.02
TDP2-205ENST00000480495 VAV2P52735 878 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 PDX1P52945 283 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 PCBP4P57723 403 aaKnown RBP14.91□□□□□ -0.02
TDP2-205ENST00000480495 DCDC1P59894 354 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 EIF3IQ13347 325 aaKnown RBP14.91□□□□□ -0.02
TDP2-205ENST00000480495 FAM182AQ5T1J6 154 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 PDPK2PQ6A1A2 396 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 MARK2Q7KZI7 788 aaKnown RBP14.91□□□□□ -0.02
TDP2-205ENST00000480495 ZNF438Q7Z4V0 828 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 SPRED1Q7Z699 444 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 SFTPA2Q8IWL1 248 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 TXLNBQ8N3L3 684 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 Q8N9G6 341 aaPredicted RBP14.91□□□□□ -0.02
TDP2-205ENST00000480495 HTR3CQ8WXA8 447 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 HAUS1Q96CS2 278 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 SLC46A1Q96NT5 459 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 BAG1Q99933 345 aaPredicted RBP14.91□□□□□ -0.02
TDP2-205ENST00000480495 ZSCAN5AQ9BUG6 496 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 HEMGNQ9BXL5 484 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 GPR63Q9BZJ6 419 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 ASCL3Q9NQ33 180 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 KLHL8Q9P2G9 620 aaPredicted RBP14.91□□□□□ -0.02
TDP2-205ENST00000480495 IMPACTQ9P2X3 320 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 TRHDEQ9UKU6 1024 aa14.91□□□□□ -0.02
TDP2-205ENST00000480495 ZNF711Q9Y462 761 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms