RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 NPC1O15118 1278 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 RGS16O15492 202 aaPredicted RBP4.12□□□□□ -1.75
CMSS1-204ENST00000479555 SNX3O60493 162 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 CCDC22O60826 627 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 CNOT3O75175 753 aaKnown RBP4.12□□□□□ -1.75
CMSS1-204ENST00000479555 FKBP6O75344 327 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 CSDE1O75534 798 aaKnown RBP4.12□□□□□ -1.75
CMSS1-204ENST00000479555 HEXIM1O94992 359 aaKnown RBP4.12□□□□□ -1.75
CMSS1-204ENST00000479555 APOEP02649 317 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 ALOX5P09917 674 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 NUDT17P0C025 328 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 ATP1A3P13637 1013 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 PLA2G2AP14555 144 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 NPPBP16860 134 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 M6PRP20645 277 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 ANXA13P27216 316 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 HMOX2P30519 316 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 RPL5P46777 297 aaKnown RBP4.12□□□□□ -1.75
CMSS1-204ENST00000479555 HSPA13P48723 471 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 NCALDP61601 193 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 AP2B1P63010 937 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 FOXO1Q12778 655 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 TBL3Q12788 808 aaKnown RBP4.12□□□□□ -1.75
CMSS1-204ENST00000479555 ASPHQ12797 758 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 STK4Q13043 487 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 SLC14A1Q13336 389 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 MED21Q13503 144 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 MEA1Q16626 185 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 KRT71Q3SY84 523 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 TTC39AQ5SRH9 613 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 ARMC3Q5W041 872 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 RESP18Q5W5W9 173 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 KCTD16Q68DU8 428 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 ABLIM2Q6H8Q1 611 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 CLEC9AQ6UXN8 241 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 RFX8Q6ZV50 586 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 NEK10Q6ZWH5 1172 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 USP43Q70EL4 1123 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 KRT27Q7Z3Y8 459 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 VPS36Q86VN1 386 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 SFR1Q86XK3 245 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 VSIG1Q86XK7 387 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 NRSN1Q8IZ57 195 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 KIRREL3Q8IZU9 778 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 BBS5Q8N3I7 341 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 LINC01465Q8N7H1 131 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 ATG16L2Q8NAA4 619 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 CATSPER1Q8NEC5 780 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 LINS1Q8NG48 757 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 WIPF2Q8TF74 440 aaPredicted RBP4.12□□□□□ -1.75
CMSS1-204ENST00000479555 NAT14Q8WUY8 206 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 GIMAP1Q8WWP7 306 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 ASB5Q8WWX0 329 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 CDKL2Q92772 493 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 ABTB1Q969K4 478 aaPredicted RBP4.12□□□□□ -1.75
CMSS1-204ENST00000479555 EID2BQ96D98 161 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 C18orf8Q96DM3 657 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 MED30Q96HR3 178 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 HS6ST2Q96MM7 605 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 BIRC8Q96P09 236 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 ZNF317Q96PQ6 595 aaPredicted RBP4.12□□□□□ -1.75
CMSS1-204ENST00000479555 SYT15Q9BQS2 421 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 NUDT22Q9BRQ3 303 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 SLC39A3Q9BRY0 314 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 KLHL4Q9C0H6 718 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 MYLK2Q9H1R3 596 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 RPAP3Q9H6T3 665 aaPredicted RBP4.12□□□□□ -1.75
CMSS1-204ENST00000479555 MLXIPQ9HAP2 919 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 OBP2BQ9NPH6 170 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 ATAD3AQ9NVI7 634 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 FKBP14Q9NWM8 211 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 HOXC10Q9NYD6 342 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 STX18Q9P2W9 335 aaKnown RBP4.12□□□□□ -1.75
CMSS1-204ENST00000479555 EPS15L1Q9UBC2 864 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 CRNNQ9UBG3 495 aaPredicted RBP4.12□□□□□ -1.75
CMSS1-204ENST00000479555 SEL1LQ9UBV2 794 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 ZMAT5Q9UDW3 170 aaKnown RBP4.12□□□□□ -1.75
CMSS1-204ENST00000479555 MTRF1LQ9UGC7 380 aaKnown RBP4.12□□□□□ -1.75
CMSS1-204ENST00000479555 BCAP29Q9UHQ4 241 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 VPS51Q9UID3 782 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 LNPEPQ9UIQ6 1025 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 ASAP1Q9ULH1 1129 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 STK38LQ9Y2H1 464 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 SLC27A6Q9Y2P4 619 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 DTNAQ9Y4J8 743 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 SCINQ9Y6U3 715 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 UMODL1Q5DID0 1318 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 COL15A1P39059 1388 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 KIDINS220Q9ULH0 1771 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 ARAP3Q8WWN8 1544 aa4.11□□□□□ -1.75
CMSS1-204ENST00000479555 SH3PXD2BA1X283 911 aa4.11□□□□□ -1.75
CMSS1-204ENST00000479555 DYTNA2CJ06 578 aa4.11□□□□□ -1.75
CMSS1-204ENST00000479555 LGALS16A8MUM7 142 aa4.11□□□□□ -1.75
CMSS1-204ENST00000479555 A8MVJ9 347 aa4.11□□□□□ -1.75
CMSS1-204ENST00000479555 TMEM114B3SHH9 223 aa4.11□□□□□ -1.75
CMSS1-204ENST00000479555 GOLGA8MH3BSY2 632 aa4.11□□□□□ -1.75
CMSS1-204ENST00000479555 ZNF701M0R085 212 aaPredicted RBP4.11□□□□□ -1.75
CMSS1-204ENST00000479555 MCF2LO15068 1137 aa4.11□□□□□ -1.75
CMSS1-204ENST00000479555 KMOO15229 486 aa4.11□□□□□ -1.75
CMSS1-204ENST00000479555 HNRNPRO43390 633 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms