RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 QPCTQ16769 361 aa17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 TAF1BQ53T94 588 aaPredicted RBP17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 RALGPS1Q5JS13 557 aa17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 ALS2CLQ60I27 953 aa17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 CLEC14AQ86T13 490 aa17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 RFX6Q8HWS3 928 aa17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 VSTM4Q8IW00 320 aa17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 KIAA1524Q8TCG1 905 aa17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 HDAC11Q96DB2 347 aa17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 RNF31Q96EP0 1072 aa17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 TSGA13Q96PP4 275 aa17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 OR2M4Q96R27 311 aa17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 STRADBQ9C0K7 418 aa17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 NHEJ1Q9H9Q4 299 aaPredicted RBP17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 FOXJ2Q9P0K8 574 aa17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 TMEM9Q9P0T7 183 aa17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 SLC17A4Q9Y2C5 497 aa17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 PRAMEF33A0A0G2JMD5 474 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 TEX51A0A1B0GUA7 166 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 C3orf70A6NLC5 250 aaPredicted RBP17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 PPM1DO15297 605 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 PRAMEF10O60809 474 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 MFAP3LO75121 409 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 TPM3P06753 285 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 ITGA2BP08514 1039 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 NFKBIAP25963 317 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 BIRC2Q13490 618 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 TSR1Q2NL82 804 aaKnown RBP17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 ALG1LQ6GMV1 187 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 IGF2-ASQ6U949 168 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 ZNF574Q6ZN55 896 aaPredicted RBP17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 LYSMD3Q7Z3D4 306 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 VASH2Q86V25 355 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 ZFAND4Q86XD8 727 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 SLITRK4Q8IW52 837 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 MAP7D3Q8IWC1 876 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 OR6C4Q8NGE1 309 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 USP7Q93009 1102 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 TMEM74Q96NL1 305 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 AGAP3Q96P47 875 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 TSPY26PQ9H489 355 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 SAE1Q9UBE0 346 aaPredicted RBP17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 ZNHIT2Q9UHR6 403 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 SHOC2Q9UQ13 582 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 EFSO43281 561 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 CBFA2T2O43439 604 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 NUDT21O43809 227 aaKnown RBP17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 IVLP07476 585 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 CCL4P13236 92 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 CCKBRP32239 447 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 ZFP36L1Q07352 338 aaKnown RBP17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 DPTQ07507 201 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 VAC14Q08AM6 782 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 ADAMTSL4Q6UY14 1074 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 CHST15Q7LFX5 561 aaPredicted RBP17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 LRRC49Q8IUZ0 686 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 NDUFAF2Q8N183 169 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 SPATA22Q8NHS9 363 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 GRAMD1AQ96CP6 724 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 EID2BQ96D98 161 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 DPH1Q9BZG8 443 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 ZMYND15Q9H091 742 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 ZNHIT6Q9NWK9 470 aaKnown RBP17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 TRNAU1APQ9NX07 287 aaKnown RBP17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 UBP1Q9NZI7 540 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 CNOT6Q9ULM6 557 aaKnown RBP17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 KCNK6Q9Y257 313 aa17.28■□□□□ 0.36
ECHDC1-216ENST00000479525 GCN1Q92616 2671 aaKnown RBP17.27■□□□□ 0.36
ECHDC1-216ENST00000479525 SSU72P8A0A1W2PR75 194 aa17.27■□□□□ 0.35
ECHDC1-216ENST00000479525 PYCARD-AS1I3L0S3 204 aa17.27■□□□□ 0.35
ECHDC1-216ENST00000479525 APOL1O14791 398 aa17.27■□□□□ 0.35
ECHDC1-216ENST00000479525 ZNF30P17039 623 aa17.27■□□□□ 0.35
ECHDC1-216ENST00000479525 CSF2RBP32927 897 aa17.27■□□□□ 0.35
ECHDC1-216ENST00000479525 MAN1A1P33908 653 aa17.27■□□□□ 0.35
ECHDC1-216ENST00000479525 CFHR1Q03591 330 aa17.27■□□□□ 0.35
ECHDC1-216ENST00000479525 PPIDQ08752 370 aaKnown RBP17.27■□□□□ 0.35
ECHDC1-216ENST00000479525 NOMO1Q15155 1222 aa17.27■□□□□ 0.35
ECHDC1-216ENST00000479525 PLA2G4EQ3MJ16 856 aa17.27■□□□□ 0.35
ECHDC1-216ENST00000479525 PYCR3Q53H96 274 aa17.27■□□□□ 0.35
ECHDC1-216ENST00000479525 KAZNQ674X7 775 aa17.27■□□□□ 0.35
ECHDC1-216ENST00000479525 MFSD7Q6UXD7 560 aa17.27■□□□□ 0.35
ECHDC1-216ENST00000479525 C17orf82Q86X59 251 aaPredicted RBP17.27■□□□□ 0.35
ECHDC1-216ENST00000479525 GALNT13Q8IUC8 556 aa17.27■□□□□ 0.35
ECHDC1-216ENST00000479525 COX14Q96I36 57 aa17.27■□□□□ 0.35
ECHDC1-216ENST00000479525 CCDC74BQ96LY2 380 aa17.27■□□□□ 0.35
ECHDC1-216ENST00000479525 ZNF830Q96NB3 372 aaPredicted RBP17.27■□□□□ 0.35
ECHDC1-216ENST00000479525 CDH19Q9H159 772 aa17.27■□□□□ 0.35
ECHDC1-216ENST00000479525 ZNF106Q9H2Y7 1883 aaKnown RBP17.26■□□□□ 0.35
ECHDC1-216ENST00000479525 C9orf172C9J069 976 aa17.26■□□□□ 0.35
ECHDC1-216ENST00000479525 SNX2O60749 519 aa17.26■□□□□ 0.35
ECHDC1-216ENST00000479525 MT-CYBP00156 380 aaPredicted RBP17.26■□□□□ 0.35
ECHDC1-216ENST00000479525 ACP5P13686 325 aa17.26■□□□□ 0.35
ECHDC1-216ENST00000479525 MX2P20592 715 aa17.26■□□□□ 0.35
ECHDC1-216ENST00000479525 CD1CP29017 333 aa17.26■□□□□ 0.35
ECHDC1-216ENST00000479525 SPINT3P49223 89 aa17.26■□□□□ 0.35
ECHDC1-216ENST00000479525 TRIM14Q14142 442 aa17.26■□□□□ 0.35
ECHDC1-216ENST00000479525 SNAP47Q5SQN1 464 aa17.26■□□□□ 0.35
ECHDC1-216ENST00000479525 CCDC81Q6ZN84 652 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms