RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 HERPUD2Q9BSE4 406 aa15.98■□□□□ 0.15
DDX56-210ENST00000479440 CNOT8Q9UFF9 292 aaKnown RBP15.98■□□□□ 0.15
DDX56-210ENST00000479440 TLK1Q9UKI8 766 aa15.98■□□□□ 0.15
DDX56-210ENST00000479440 NBASA2RRP1 2371 aa15.97■□□□□ 0.15
DDX56-210ENST00000479440 CDC14CA4D256 554 aa15.97■□□□□ 0.15
DDX56-210ENST00000479440 KATNA1O75449 491 aa15.97■□□□□ 0.15
DDX56-210ENST00000479440 DDAH2O95865 285 aa15.97■□□□□ 0.15
DDX56-210ENST00000479440 SOD1P00441 154 aa15.97■□□□□ 0.15
DDX56-210ENST00000479440 SOX5P35711 763 aa15.97■□□□□ 0.15
DDX56-210ENST00000479440 CLEC16AQ2KHT3 1053 aa15.97■□□□□ 0.15
DDX56-210ENST00000479440 BBS5Q8N3I7 341 aa15.97■□□□□ 0.15
DDX56-210ENST00000479440 FNIP1Q8TF40 1166 aa15.97■□□□□ 0.15
DDX56-210ENST00000479440 AP2M1Q96CW1 435 aa15.97■□□□□ 0.15
DDX56-210ENST00000479440 NUDCD1Q96RS6 583 aa15.97■□□□□ 0.15
DDX56-210ENST00000479440 TWSG1Q9GZX9 223 aa15.97■□□□□ 0.15
DDX56-210ENST00000479440 VPS16Q9H269 839 aa15.97■□□□□ 0.15
DDX56-210ENST00000479440 GANQ9H2C0 597 aa15.97■□□□□ 0.15
DDX56-210ENST00000479440 DHX35Q9H5Z1 703 aaKnown RBP15.97■□□□□ 0.15
DDX56-210ENST00000479440 TMEM98Q9Y2Y6 226 aa15.97■□□□□ 0.15
DDX56-210ENST00000479440 PCDHGC4Q9Y5F7 938 aa15.97■□□□□ 0.15
DDX56-210ENST00000479440 USP9XQ93008 2570 aaPredicted RBP15.96■□□□□ 0.15
DDX56-210ENST00000479440 UNC79Q9P2D8 2635 aa15.96■□□□□ 0.15
DDX56-210ENST00000479440 A1L4Q6 167 aa15.96■□□□□ 0.15
DDX56-210ENST00000479440 LILRA5A6NI73 299 aa15.96■□□□□ 0.15
DDX56-210ENST00000479440 HSP90AA4PQ58FG1 418 aa15.96■□□□□ 0.15
DDX56-210ENST00000479440 CYB5D1Q6P9G0 228 aa15.96■□□□□ 0.15
DDX56-210ENST00000479440 DCUN1D2Q6PH85 259 aa15.96■□□□□ 0.15
DDX56-210ENST00000479440 ARHGAP36Q6ZRI8 547 aa15.96■□□□□ 0.15
DDX56-210ENST00000479440 RFX8Q6ZV50 586 aa15.96■□□□□ 0.15
DDX56-210ENST00000479440 MON1BQ7L1V2 547 aa15.96■□□□□ 0.15
DDX56-210ENST00000479440 ZNF765Q7L2R6 523 aa15.96■□□□□ 0.15
DDX56-210ENST00000479440 LYSMD3Q7Z3D4 306 aa15.96■□□□□ 0.15
DDX56-210ENST00000479440 TRIM74Q86UV6 250 aa15.96■□□□□ 0.15
DDX56-210ENST00000479440 APLFQ8IW19 511 aaPredicted RBP15.96■□□□□ 0.15
DDX56-210ENST00000479440 NDUFAF2Q8N183 169 aa15.96■□□□□ 0.15
DDX56-210ENST00000479440 CBARPQ8N350 705 aaPredicted RBP15.96■□□□□ 0.15
DDX56-210ENST00000479440 NPWQ8N729 165 aa15.96■□□□□ 0.15
DDX56-210ENST00000479440 GALNT6Q8NCL4 622 aa15.96■□□□□ 0.15
DDX56-210ENST00000479440 SEC14L1Q92503 715 aa15.96■□□□□ 0.15
DDX56-210ENST00000479440 SCRN2Q96FV2 425 aa15.96■□□□□ 0.15
DDX56-210ENST00000479440 NSMCE3Q96MG7 304 aa15.96■□□□□ 0.15
DDX56-210ENST00000479440 MCCC1Q96RQ3 725 aaPredicted RBP15.96■□□□□ 0.15
DDX56-210ENST00000479440 SEPT11Q9NVA2 429 aaKnown RBP15.96■□□□□ 0.15
DDX56-210ENST00000479440 GPATCH2LQ9NWQ4 482 aa15.96■□□□□ 0.15
DDX56-210ENST00000479440 CD84Q9UIB8 345 aa15.96■□□□□ 0.15
DDX56-210ENST00000479440 SPTAN1Q13813 2472 aaKnown RBP15.95■□□□□ 0.14
DDX56-210ENST00000479440 KIR2DS5A0A0G2JLQ3 304 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 A0A0G2JNG1 304 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 KIR2DS3K7RE56 304 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 SEMA7AO75326 666 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 NDUFA10O95299 355 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 ASMTLO95671 621 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 EML2O95834 649 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 RECKO95980 971 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 FURINP09958 794 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 CCNYL3P0C7X3 344 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 ERCC2P18074 760 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 CASP14P31944 242 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 PGDP52209 483 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 RPL7AP62424 266 aaKnown RBP15.95■□□□□ 0.14
DDX56-210ENST00000479440 TRAF2Q12933 501 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 KIR2DS5Q14953 304 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 RALGPS1Q5JS13 557 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 ARMC12Q5T9G4 340 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 CHST15Q7LFX5 561 aaPredicted RBP15.95■□□□□ 0.14
DDX56-210ENST00000479440 TECPR1Q7Z6L1 1165 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 TSPAN33Q86UF1 283 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 RASGRP3Q8IV61 690 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 MGME1Q9BQP7 344 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 VPS18Q9P253 973 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 RCOR3Q9P2K3 495 aaPredicted RBP15.95■□□□□ 0.14
DDX56-210ENST00000479440 PCDHGA6Q9Y5G7 932 aa15.95■□□□□ 0.14
DDX56-210ENST00000479440 TCRBV5S1A1TA0A578 114 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 OR5K4A6NMS3 321 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 CREG1O75629 220 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 KIAA0754O94854 1291 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 PGLSO95336 258 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 MT-ND3P03897 115 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 PDGFAP04085 211 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 ZNF28P17035 718 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 ZNF30P17039 623 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 GARSP41250 739 aaKnown RBP15.94■□□□□ 0.14
DDX56-210ENST00000479440 ZNF135P52742 658 aaPredicted RBP15.94■□□□□ 0.14
DDX56-210ENST00000479440 JAM2P57087 298 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 POLR2FP61218 127 aaKnown RBP15.94■□□□□ 0.14
DDX56-210ENST00000479440 SLC10A7Q0GE19 358 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 SEMA5AQ13591 1074 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 DNASE1L3Q13609 305 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 IL11RAQ14626 422 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 PPP1R15BQ5SWA1 713 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 LRRC66Q68CR7 880 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 IYDQ6PHW0 289 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 TMEM135Q86UB9 458 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 EXD1Q8NHP7 514 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 COX14Q96I36 57 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 C9orf72Q96LT7 481 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 OR6C1Q96RD1 312 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 PCDHB18PQ96TA0 734 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 TBC1D10AQ9BXI6 508 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 SLC29A3Q9BZD2 475 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms