RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 FAM162AQ96A26 154 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 ZFYVE19Q96K21 471 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 HGH1Q9BTY7 390 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 KRTAP4-11Q9BYQ6 195 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 KCNN2Q9H2S1 579 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 GRPEL1Q9HAV7 217 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 GPR108Q9NPR9 543 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 IL17BQ9UHF5 180 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 ANAPC5Q9UJX4 755 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 ACSL5Q9ULC5 683 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.19□□□□□ -1.58
UPF3B-203ENST00000478840 PPP6CO00743 305 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 SLC7A4O43246 635 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 CHRNB1P11230 501 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 GNLYP22749 145 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 OAS2P29728 719 aaKnown RBP5.18□□□□□ -1.58
UPF3B-203ENST00000478840 TNNT3P45378 269 aaPredicted RBP5.18□□□□□ -1.58
UPF3B-203ENST00000478840 PTH2RP49190 550 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 INHBCP55103 352 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 PLIN5Q00G26 463 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 GAD2Q05329 585 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 DPTQ07507 201 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 GRSF1Q12849 480 aaKnown RBP eCLIP5.18□□□□□ -1.58
UPF3B-203ENST00000478840 CAMK2DQ13557 499 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 NEDD9Q14511 834 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 HYAL4Q2M3T9 481 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 CEP78Q5JTW2 689 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 Q5PR19 223 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 TRAT1Q6PIZ9 186 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 ERN2Q76MJ5 926 aaKnown RBP5.18□□□□□ -1.58
UPF3B-203ENST00000478840 CAMKMTQ7Z624 323 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 BOLLQ8N9W6 283 aaKnown RBP5.18□□□□□ -1.58
UPF3B-203ENST00000478840 ENGASEQ8NFI3 743 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 KIF18AQ8NI77 898 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 GPT2Q8TD30 523 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 DPF1Q92782 380 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 ERGIC1Q969X5 290 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 CDRT15Q96T59 188 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 C2orf40Q9H1Z8 148 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 PPIL3Q9H2H8 161 aaKnown RBP5.18□□□□□ -1.58
UPF3B-203ENST00000478840 SLCO5A1Q9H2Y9 848 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 PIGMQ9H3S5 423 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 KCNK15Q9H427 330 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 XAB2Q9HCS7 855 aaKnown RBP5.18□□□□□ -1.58
UPF3B-203ENST00000478840 MBNL1Q9NR56 388 aaKnown RBP5.18□□□□□ -1.58
UPF3B-203ENST00000478840 ACSS1Q9NUB1 689 aaPredicted RBP5.18□□□□□ -1.58
UPF3B-203ENST00000478840 OLAHQ9NV23 265 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 TRMT1Q9NXH9 659 aaKnown RBP5.18□□□□□ -1.58
UPF3B-203ENST00000478840 FLRT1Q9NZU1 646 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 RASAL2Q9UJF2 1139 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 PCDHA12Q9UN75 941 aa5.18□□□□□ -1.58
UPF3B-203ENST00000478840 ZFP37Q9Y6Q3 630 aaPredicted RBP5.18□□□□□ -1.58
UPF3B-203ENST00000478840 SMIM35A0A1B0GVV1 85 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 TMEM8BA6NDV4 472 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 E5RJQ4 531 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 CCDC188H7C350 402 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 MOSPD3O75425 235 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 GH2P01242 217 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 CYC1P08574 325 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 SELENOVP59797 346 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 MMEL1Q495T6 779 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 ARMC4Q5T2S8 1044 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 MFSD6Q6ZSS7 791 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 SDCCAG8Q86SQ7 713 aaPredicted RBP5.17□□□□□ -1.58
UPF3B-203ENST00000478840 LDB1Q86U70 411 aaPredicted RBP5.17□□□□□ -1.58
UPF3B-203ENST00000478840 MAML2Q8IZL2 1156 aaPredicted RBP5.17□□□□□ -1.58
UPF3B-203ENST00000478840 PI4KAP1Q8N8J0 262 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 CFAP61Q8NHU2 1237 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 ARRDC2Q8TBH0 407 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 HDAC11Q96DB2 347 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 SIPA1Q96FS4 1042 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 ZNF830Q96NB3 372 aaPredicted RBP5.17□□□□□ -1.58
UPF3B-203ENST00000478840 GBP5Q96PP8 586 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 SPAG5Q96R06 1193 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 PPP1R3EQ9H7J1 279 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 MMP25Q9NPA2 562 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 PFDN4Q9NQP4 134 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 HAO2Q9NYQ3 351 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 OR14J1Q9UGF5 321 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 DDX25Q9UHL0 483 aaKnown RBP5.17□□□□□ -1.58
UPF3B-203ENST00000478840 DMRT1Q9Y5R6 373 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 HS3ST3A1Q9Y663 406 aa5.17□□□□□ -1.58
UPF3B-203ENST00000478840 CPED1A4D0V7 1026 aa5.16□□□□□ -1.58
UPF3B-203ENST00000478840 MANSC4A6NHS7 340 aaPredicted RBP5.16□□□□□ -1.58
UPF3B-203ENST00000478840 H3BQ06 376 aaPredicted RBP5.16□□□□□ -1.58
UPF3B-203ENST00000478840 M0QZ24 198 aa5.16□□□□□ -1.58
UPF3B-203ENST00000478840 WDR46O15213 610 aaKnown RBP5.16□□□□□ -1.58
UPF3B-203ENST00000478840 TADA2AO75478 443 aa5.16□□□□□ -1.58
UPF3B-203ENST00000478840 RSL1D1O76021 490 aaKnown RBP5.16□□□□□ -1.58
UPF3B-203ENST00000478840 ERCC2P18074 760 aa5.16□□□□□ -1.58
UPF3B-203ENST00000478840 NR2F2P24468 414 aa5.16□□□□□ -1.58
UPF3B-203ENST00000478840 ATP5DP30049 168 aa5.16□□□□□ -1.58
UPF3B-203ENST00000478840 MC5RP33032 325 aa5.16□□□□□ -1.58
UPF3B-203ENST00000478840 RAB28P51157 221 aa5.16□□□□□ -1.58
UPF3B-203ENST00000478840 ZNF91Q05481 1191 aa5.16□□□□□ -1.58
UPF3B-203ENST00000478840 INPP5JQ15735 1006 aaPredicted RBP5.16□□□□□ -1.58
UPF3B-203ENST00000478840 SNAPC1Q16533 368 aa5.16□□□□□ -1.58
UPF3B-203ENST00000478840 CDC37Q16543 378 aaPredicted RBP5.16□□□□□ -1.58
UPF3B-203ENST00000478840 PPP6R3Q5H9R7 873 aaPredicted RBP5.16□□□□□ -1.58
UPF3B-203ENST00000478840 LCN10Q6JVE6 187 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms