RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 DESP17661 470 aa17.05■□□□□ 0.32
VIM-204ENST00000478746 LHCGRP22888 699 aa17.05■□□□□ 0.32
VIM-204ENST00000478746 SOX5P35711 763 aa17.05■□□□□ 0.32
VIM-204ENST00000478746 RPL7AP62424 266 aaKnown RBP17.05■□□□□ 0.32
VIM-204ENST00000478746 LBRQ14739 615 aaKnown RBP17.05■□□□□ 0.32
VIM-204ENST00000478746 DNAJC24Q6P3W2 148 aa17.05■□□□□ 0.32
VIM-204ENST00000478746 IYDQ6PHW0 289 aa17.05■□□□□ 0.32
VIM-204ENST00000478746 ADAMTSL4Q6UY14 1074 aa17.05■□□□□ 0.32
VIM-204ENST00000478746 TECPR1Q7Z6L1 1165 aa17.05■□□□□ 0.32
VIM-204ENST00000478746 SCRN2Q96FV2 425 aa17.05■□□□□ 0.32
VIM-204ENST00000478746 MCEEQ96PE7 176 aa17.05■□□□□ 0.32
VIM-204ENST00000478746 DHX35Q9H5Z1 703 aaKnown RBP17.05■□□□□ 0.32
VIM-204ENST00000478746 CUEDC1Q9NWM3 386 aaPredicted RBP17.05■□□□□ 0.32
VIM-204ENST00000478746 ZNHIT2Q9UHR6 403 aa17.05■□□□□ 0.32
VIM-204ENST00000478746 CD84Q9UIB8 345 aa17.05■□□□□ 0.32
VIM-204ENST00000478746 AP4E1Q9UPM8 1137 aa17.05■□□□□ 0.32
VIM-204ENST00000478746 SPENQ96T58 3664 aaKnown RBP17.05■□□□□ 0.32
VIM-204ENST00000478746 CDC14CA4D256 554 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 NPIPB15A6NHN6 443 aaPredicted RBP17.04■□□□□ 0.32
VIM-204ENST00000478746 ASMTLO95671 621 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 ZNF28P17035 718 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 PMS2P54278 862 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 EPHA4P54764 986 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 SLC10A7Q0GE19 358 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 PTPRRQ15256 657 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 CLEC16AQ2KHT3 1053 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 TMCO4Q5TGY1 634 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 RFLNAQ6ZTI6 216 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 TMEM135Q86UB9 458 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 SLC9B2Q86UD5 537 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 TSPAN33Q86UF1 283 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 TRIM74Q86UV6 250 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 PLXDC1Q8IUK5 500 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 GALNT6Q8NCL4 622 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 FNIP1Q8TF40 1166 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 AP2M1Q96CW1 435 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 RNF31Q96EP0 1072 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.04■□□□□ 0.32
VIM-204ENST00000478746 TWSG1Q9GZX9 223 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 ABCG8Q9H221 673 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 NOD2Q9HC29 1040 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 KCND3Q9UK17 655 aa17.04■□□□□ 0.32
VIM-204ENST00000478746 PRRC2CQ9Y520 2896 aaKnown RBP17.04■□□□□ 0.32
VIM-204ENST00000478746 TCRBV5S1A1TA0A578 114 aa17.03■□□□□ 0.32
VIM-204ENST00000478746 A1L4Q6 167 aa17.03■□□□□ 0.32
VIM-204ENST00000478746 PIPSLA2A3N6 862 aa17.03■□□□□ 0.32
VIM-204ENST00000478746 SOD1P00441 154 aa17.03■□□□□ 0.32
VIM-204ENST00000478746 PDGFAP04085 211 aa17.03■□□□□ 0.32
VIM-204ENST00000478746 ERCC2P18074 760 aa17.03■□□□□ 0.32
VIM-204ENST00000478746 POLR2FP61218 127 aaKnown RBP17.03■□□□□ 0.32
VIM-204ENST00000478746 ZNF235Q14590 738 aa17.03■□□□□ 0.32
VIM-204ENST00000478746 CA9Q16790 459 aa17.03■□□□□ 0.32
VIM-204ENST00000478746 DCUN1D2Q6PH85 259 aa17.03■□□□□ 0.32
VIM-204ENST00000478746 CHST15Q7LFX5 561 aaPredicted RBP17.03■□□□□ 0.32
VIM-204ENST00000478746 LYSMD3Q7Z3D4 306 aa17.03■□□□□ 0.32
VIM-204ENST00000478746 STAMBPL1Q96FJ0 436 aa17.03■□□□□ 0.32
VIM-204ENST00000478746 ZNF599Q96NL3 588 aa17.03■□□□□ 0.32
VIM-204ENST00000478746 NUDCD1Q96RS6 583 aa17.03■□□□□ 0.32
VIM-204ENST00000478746 GANQ9H2C0 597 aa17.03■□□□□ 0.32
VIM-204ENST00000478746 EPB41L1Q9H4G0 881 aa17.03■□□□□ 0.32
VIM-204ENST00000478746 NLRC4Q9NPP4 1024 aa17.03■□□□□ 0.32
VIM-204ENST00000478746 SIDT1Q9NXL6 827 aaKnown RBP17.03■□□□□ 0.32
VIM-204ENST00000478746 CNOT8Q9UFF9 292 aaKnown RBP17.03■□□□□ 0.32
VIM-204ENST00000478746 TBC1D29Q9UFV1 150 aa17.03■□□□□ 0.32
VIM-204ENST00000478746 OAS3Q9Y6K5 1087 aaKnown RBP17.03■□□□□ 0.32
VIM-204ENST00000478746 CELSR2Q9HCU4 2923 aa17.02■□□□□ 0.32
VIM-204ENST00000478746 A0A0U1RQS6 177 aa17.02■□□□□ 0.32
VIM-204ENST00000478746 EIF3CLB5ME19 914 aaKnown RBP17.02■□□□□ 0.32
VIM-204ENST00000478746 CCNYL3P0C7X3 344 aa17.02■□□□□ 0.32
VIM-204ENST00000478746 SLC2A4P14672 509 aa17.02■□□□□ 0.32
VIM-204ENST00000478746 CTPS1P17812 591 aa17.02■□□□□ 0.32
VIM-204ENST00000478746 TNFAIP3P21580 790 aa17.02■□□□□ 0.32
VIM-204ENST00000478746 HSPA9P38646 679 aaKnown RBP17.02■□□□□ 0.32
VIM-204ENST00000478746 BECN1Q14457 450 aa17.02■□□□□ 0.32
VIM-204ENST00000478746 ERMARDQ5T6L9 678 aa17.02■□□□□ 0.32
VIM-204ENST00000478746 RFX8Q6ZV50 586 aa17.02■□□□□ 0.32
VIM-204ENST00000478746 USP45Q70EL2 814 aa17.02■□□□□ 0.32
VIM-204ENST00000478746 MON1BQ7L1V2 547 aa17.02■□□□□ 0.32
VIM-204ENST00000478746 NLRP8Q86W28 1048 aa17.02■□□□□ 0.32
VIM-204ENST00000478746 RASGRP3Q8IV61 690 aa17.02■□□□□ 0.32
VIM-204ENST00000478746 APLFQ8IW19 511 aaPredicted RBP17.02■□□□□ 0.32
VIM-204ENST00000478746 NPWQ8N729 165 aa17.02■□□□□ 0.32
VIM-204ENST00000478746 SCAMP4Q969E2 229 aa17.02■□□□□ 0.32
VIM-204ENST00000478746 EIF3CQ99613 913 aaKnown RBP17.02■□□□□ 0.32
VIM-204ENST00000478746 TBC1D10AQ9BXI6 508 aa17.02■□□□□ 0.32
VIM-204ENST00000478746 SEPT11Q9NVA2 429 aaKnown RBP17.02■□□□□ 0.32
VIM-204ENST00000478746 PPIL1Q9Y3C6 166 aa17.02■□□□□ 0.32
VIM-204ENST00000478746 PRKAB1Q9Y478 270 aa17.02■□□□□ 0.32
VIM-204ENST00000478746 MAP4K5Q9Y4K4 846 aa17.02■□□□□ 0.32
VIM-204ENST00000478746 CRYBG3Q68DQ2 2970 aa17.02■□□□□ 0.31
VIM-204ENST00000478746 SNX2O60749 519 aa17.01■□□□□ 0.31
VIM-204ENST00000478746 CREG1O75629 220 aa17.01■□□□□ 0.31
VIM-204ENST00000478746 KIAA0754O94854 1291 aa17.01■□□□□ 0.31
VIM-204ENST00000478746 DDAH2O95865 285 aa17.01■□□□□ 0.31
VIM-204ENST00000478746 RECKO95980 971 aa17.01■□□□□ 0.31
VIM-204ENST00000478746 PYGLP06737 847 aa17.01■□□□□ 0.31
VIM-204ENST00000478746 ANKRD34CP0C6C1 535 aa17.01■□□□□ 0.31
VIM-204ENST00000478746 RNF224P0DH78 156 aa17.01■□□□□ 0.31
VIM-204ENST00000478746 JAM2P57087 298 aa17.01■□□□□ 0.31
VIM-204ENST00000478746 TRAF2Q12933 501 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms