RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 ZNF235Q14590 738 aa14.53□□□□□ -0.08
USP11-207ENST00000478596 NOMO1Q15155 1222 aa14.53□□□□□ -0.08
USP11-207ENST00000478596 TMEM164Q5U3C3 297 aa14.53□□□□□ -0.08
USP11-207ENST00000478596 SEL1L3Q68CR1 1132 aa14.53□□□□□ -0.08
USP11-207ENST00000478596 LINGO4Q6UY18 593 aa14.53□□□□□ -0.08
USP11-207ENST00000478596 ARHGAP12Q8IWW6 846 aa14.53□□□□□ -0.08
USP11-207ENST00000478596 SRRM1Q8IYB3 904 aaKnown RBP14.53□□□□□ -0.08
USP11-207ENST00000478596 ARL10Q8N8L6 244 aa14.53□□□□□ -0.08
USP11-207ENST00000478596 ATP11CQ8NB49 1132 aa14.53□□□□□ -0.08
USP11-207ENST00000478596 TFB1MQ8WVM0 346 aaKnown RBP14.53□□□□□ -0.08
USP11-207ENST00000478596 C1orf54Q8WWF1 131 aa14.53□□□□□ -0.08
USP11-207ENST00000478596 ATG4AQ8WYN0 398 aa14.53□□□□□ -0.08
USP11-207ENST00000478596 CCDC74AQ96AQ1 378 aa14.53□□□□□ -0.08
USP11-207ENST00000478596 QKIQ96PU8 341 aaKnown RBP eCLIP14.53□□□□□ -0.08
USP11-207ENST00000478596 LRRC19Q9H756 370 aa14.53□□□□□ -0.08
USP11-207ENST00000478596 ZNF212Q9UDV6 495 aa14.53□□□□□ -0.08
USP11-207ENST00000478596 IPO11Q9UI26 975 aaKnown RBP14.53□□□□□ -0.08
USP11-207ENST00000478596 ZNF891A8MT65 544 aaPredicted RBP14.52□□□□□ -0.09
USP11-207ENST00000478596 FANCGO15287 622 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 YY2O15391 372 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 SPINT1O43278 529 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 BNIP3LO60238 219 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 LIFP15018 202 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 MAPK10P53779 464 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 ACCSLQ4AC99 568 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 PRRT3Q5FWE3 981 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 TPRG1LQ5T0D9 272 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 TMCO4Q5TGY1 634 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 GSTA5Q7RTV2 222 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 TP53INP2Q8IXH6 220 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 CCDC13Q8IYE1 715 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 RBFAQ8N0V3 343 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 SDR16C5Q8N3Y7 309 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 RASGEF1CQ8N431 466 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 PAF1Q8N7H5 531 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 ACTRT1Q8TDG2 376 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 LRRN4Q8WUT4 740 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 JPH3Q8WXH2 748 aaPredicted RBP14.52□□□□□ -0.09
USP11-207ENST00000478596 LRRC61Q9BV99 259 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 CINPQ9BW66 212 aaPredicted RBP14.52□□□□□ -0.09
USP11-207ENST00000478596 SLC17A9Q9BYT1 436 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 FRMD8P1Q9BZ68 369 aaPredicted RBP14.52□□□□□ -0.09
USP11-207ENST00000478596 CPEB1Q9BZB8 566 aaKnown RBP14.52□□□□□ -0.09
USP11-207ENST00000478596 CDH19Q9H159 772 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 LRRN3Q9H3W5 708 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 NOL6Q9H6R4 1146 aaKnown RBP14.52□□□□□ -0.09
USP11-207ENST00000478596 HOMER3Q9NSC5 361 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 APOBEC3BQ9UH17 382 aaKnown RBP14.52□□□□□ -0.09
USP11-207ENST00000478596 R3HDM2Q9Y2K5 976 aaKnown RBP14.52□□□□□ -0.09
USP11-207ENST00000478596 ANKRD36A6QL64 1941 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 F8P00451 2351 aa14.52□□□□□ -0.09
USP11-207ENST00000478596 RP1L1Q8IWN7 2480 aaPredicted RBP14.51□□□□□ -0.09
USP11-207ENST00000478596 HACD1B0YJ81 288 aa14.51□□□□□ -0.09
USP11-207ENST00000478596 CAPN5O15484 640 aaPredicted RBP14.51□□□□□ -0.09
USP11-207ENST00000478596 KDELR3O43731 214 aa14.51□□□□□ -0.09
USP11-207ENST00000478596 ZNF189O75820 626 aaPredicted RBP14.51□□□□□ -0.09
USP11-207ENST00000478596 PCDH8O95206 1070 aa14.51□□□□□ -0.09
USP11-207ENST00000478596 RBP3P10745 1247 aa14.51□□□□□ -0.09
USP11-207ENST00000478596 RECQLP46063 649 aaPredicted RBP14.51□□□□□ -0.09
USP11-207ENST00000478596 PLK1P53350 603 aa14.51□□□□□ -0.09
USP11-207ENST00000478596 IL10RBQ08334 325 aa14.51□□□□□ -0.09
USP11-207ENST00000478596 KLF1Q13351 362 aaPredicted RBP14.51□□□□□ -0.09
USP11-207ENST00000478596 FGL2Q14314 439 aa14.51□□□□□ -0.09
USP11-207ENST00000478596 ARTNQ5T4W7 220 aa14.51□□□□□ -0.09
USP11-207ENST00000478596 C1QL3Q5VWW1 255 aa14.51□□□□□ -0.09
USP11-207ENST00000478596 AFMIDQ63HM1 303 aa14.51□□□□□ -0.09
USP11-207ENST00000478596 ARHGAP36Q6ZRI8 547 aa14.51□□□□□ -0.09
USP11-207ENST00000478596 B4GALNT4Q76KP1 1039 aa14.51□□□□□ -0.09
USP11-207ENST00000478596 HEATR4Q86WZ0 1026 aa14.51□□□□□ -0.09
USP11-207ENST00000478596 LRRC49Q8IUZ0 686 aa14.51□□□□□ -0.09
USP11-207ENST00000478596 OR6C4Q8NGE1 309 aa14.51□□□□□ -0.09
USP11-207ENST00000478596 HDAC11Q96DB2 347 aa14.51□□□□□ -0.09
USP11-207ENST00000478596 KLC2Q9H0B6 622 aa14.51□□□□□ -0.09
USP11-207ENST00000478596 BRD8Q9H0E9 1235 aa14.51□□□□□ -0.09
USP11-207ENST00000478596 TCEAL2Q9H3H9 227 aaPredicted RBP14.51□□□□□ -0.09
USP11-207ENST00000478596 RNF14Q9UBS8 474 aa14.51□□□□□ -0.09
USP11-207ENST00000478596 ZNF148Q9UQR1 794 aa14.51□□□□□ -0.09
USP11-207ENST00000478596 ADGRG4Q8IZF6 3080 aa14.51□□□□□ -0.09
USP11-207ENST00000478596 WIPF3A6NGB9 483 aa14.5□□□□□ -0.09
USP11-207ENST00000478596 J3KR12 359 aa14.5□□□□□ -0.09
USP11-207ENST00000478596 RAD51BO15315 384 aa14.5□□□□□ -0.09
USP11-207ENST00000478596 KCNN4O15554 427 aa14.5□□□□□ -0.09
USP11-207ENST00000478596 PRAMEF11O60813 436 aa14.5□□□□□ -0.09
USP11-207ENST00000478596 CLDN1O95832 211 aa14.5□□□□□ -0.09
USP11-207ENST00000478596 PAK4O96013 591 aaPredicted RBP14.5□□□□□ -0.09
USP11-207ENST00000478596 GRNP28799 593 aaKnown RBP14.5□□□□□ -0.09
USP11-207ENST00000478596 SERPINH1P50454 418 aaKnown RBP14.5□□□□□ -0.09
USP11-207ENST00000478596 PFN3P60673 137 aa14.5□□□□□ -0.09
USP11-207ENST00000478596 RHOAP61586 193 aa14.5□□□□□ -0.09
USP11-207ENST00000478596 RPS21P63220 83 aaKnown RBP14.5□□□□□ -0.09
USP11-207ENST00000478596 PPIDQ08752 370 aaKnown RBP14.5□□□□□ -0.09
USP11-207ENST00000478596 ITKQ08881 620 aa14.5□□□□□ -0.09
USP11-207ENST00000478596 SLC10A2Q12908 348 aaPredicted RBP14.5□□□□□ -0.09
USP11-207ENST00000478596 C1orf61Q13536 156 aa14.5□□□□□ -0.09
USP11-207ENST00000478596 TUBB2AQ13885 445 aa14.5□□□□□ -0.09
USP11-207ENST00000478596 WHAMMP3Q1A5X7 153 aa14.5□□□□□ -0.09
USP11-207ENST00000478596 KIAA1161Q6NSJ0 714 aa14.5□□□□□ -0.09
USP11-207ENST00000478596 LVRNQ6Q4G3 990 aa14.5□□□□□ -0.09
USP11-207ENST00000478596 Q6ZVU0 165 aa14.5□□□□□ -0.09
USP11-207ENST00000478596 RYBPQ8N488 228 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms