RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 IQCF5A8MTL0 148 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 CXorf49A8MYA2 514 aaPredicted RBP14.16□□□□□ -0.14
NPHP4-208ENST00000478423 H3BN98 237 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 DNM1LO00429 736 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 ZNF132P52740 706 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 AP5B1Q2VPB7 878 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 MSS51Q4VC12 460 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 APLFQ8IW19 511 aaPredicted RBP14.16□□□□□ -0.14
NPHP4-208ENST00000478423 ADHFE1Q8IWW8 467 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 CPNE9Q8IYJ1 553 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 ESAMQ96AP7 390 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 PHF21AQ96BD5 680 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 LENG8Q96PV6 779 aaPredicted RBP14.16□□□□□ -0.14
NPHP4-208ENST00000478423 RHBGQ9H310 441 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 RIBC2Q9H4K1 309 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 REEP1Q9H902 201 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 FBXL21Q9UKT6 434 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 H3BM21 787 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 NFATC1O95644 943 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 EPHX1P07099 455 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 SOX4Q06945 474 aaPredicted RBP14.16□□□□□ -0.14
NPHP4-208ENST00000478423 TSNQ15631 228 aaKnown RBP14.16□□□□□ -0.14
NPHP4-208ENST00000478423 INTS11Q5TA45 600 aaKnown RBP14.16□□□□□ -0.14
NPHP4-208ENST00000478423 RGL4Q8IZJ4 473 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 TRIB2Q92519 343 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 ATG10Q9H0Y0 220 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 USE1Q9NZ43 259 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 OR2AG2A6NM03 316 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 PSMB9P28065 219 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 HTR1BP28222 390 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 WNT7BP56706 349 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 SEMG2Q02383 582 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 TXNDC8Q6A555 127 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 SERPINA9Q86WD7 417 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 PQLC3Q8N755 202 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 PROX1Q92786 737 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 CLPTM1LQ96KA5 538 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 MAGEB10Q96LZ2 347 aaPredicted RBP14.16□□□□□ -0.14
NPHP4-208ENST00000478423 IPPKQ9H8X2 491 aa14.16□□□□□ -0.14
NPHP4-208ENST00000478423 POLR3HQ9Y535 204 aaPredicted RBP14.16□□□□□ -0.14
NPHP4-208ENST00000478423 TBC1D3DA0A087WVF3 549 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 TBC1D3IA0A087WXS9 549 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 TBC1D3EA0A087X179 549 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 TBC1D3KA0A087X1G2 549 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 A0A1W2PQ67 120 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 KRT87PA6NCN2 255 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 TBC1D3FA6NER0 549 aaPredicted RBP14.15□□□□□ -0.14
NPHP4-208ENST00000478423 OR51F1A6NGY5 319 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 TBC1D3LB9A6J9 549 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 H0Y858 1186 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 RFXANKO14593 260 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 BMP10O95393 424 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 EIF2S1P05198 315 aaKnown RBP14.15□□□□□ -0.14
NPHP4-208ENST00000478423 TBC1D3HP0C7X1 549 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 PABPC1P11940 636 aaKnown RBP14.15□□□□□ -0.14
NPHP4-208ENST00000478423 HSPA7P48741 367 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 SLC11A1P49279 550 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 CENPAP49450 140 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 KCNJ11Q14654 390 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 NEDD8Q15843 81 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 TBC1D3GQ6DHY5 549 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 TBC1D3CQ6IPX1 549 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 AGMOQ6ZNB7 445 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 SERINC5Q86VE9 423 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 TBC1D3Q8IZP1 549 aaPredicted RBP14.15□□□□□ -0.14
NPHP4-208ENST00000478423 OR13C4Q8NGS5 318 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 CLHC1Q8NHS4 586 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 APOLD1Q96LR9 279 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 STRA6Q9BX79 667 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 NDOR1Q9UHB4 597 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 MAPRE3Q9UPY8 281 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 HS3ST4Q9Y661 456 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 NEMP2A6NFY4 417 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 ISM1B1AKI9 464 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 RPIAP49247 311 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 CLCQ05315 142 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 GPR17Q13304 367 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 ZNF549Q6P9A3 640 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 SPESP1Q6UW49 350 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 FAM124AQ86V42 546 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 HPS6Q86YV9 775 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 WDTC1Q8N5D0 677 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 GLMNQ92990 594 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 RTKNQ9BST9 563 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 NLNQ9BYT8 704 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 SMOC2Q9H3U7 446 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 ABCB8Q9NUT2 735 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 CD84Q9UIB8 345 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 CNTN6Q9UQ52 1028 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 TRPM3Q9HCF6 1732 aaPredicted RBP14.15□□□□□ -0.14
NPHP4-208ENST00000478423 MYH1P12882 1939 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 TTC24A2A3L6 582 aaPredicted RBP14.15□□□□□ -0.14
NPHP4-208ENST00000478423 CCDC162PA2VCL2 907 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 J3KR12 359 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 UBXN8O00124 270 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 GJA1P17302 382 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 EPORP19235 508 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 GNPDA1P46926 289 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 LCP2Q13094 533 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 TWIST2Q8WVJ9 160 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms