RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 TMPRSS7Q7RTY8 843 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 GKN2Q86XP6 184 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 SLC35F3Q8IY50 421 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 TTC30BQ8N4P2 665 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 CCL4L1Q8NHW4 92 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 COX14Q96I36 57 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 HIC2Q96JB3 615 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 SRPK1Q96SB4 655 aaKnown RBP15.5■□□□□ 0.07
HMGA1-206ENST00000478214 TMEM121Q9BTD3 319 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 FSD1LQ9BXM9 530 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 CARD9Q9H257 536 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 KCNF1Q9H3M0 494 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 CNOT6Q9ULM6 557 aaKnown RBP15.5■□□□□ 0.07
HMGA1-206ENST00000478214 SUFUQ9UMX1 484 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 FRYQ5TBA9 3013 aa15.5■□□□□ 0.07
HMGA1-206ENST00000478214 FAM149AA5PLN7 773 aa15.49■□□□□ 0.07
HMGA1-206ENST00000478214 ZNF189O75820 626 aaPredicted RBP15.49■□□□□ 0.07
HMGA1-206ENST00000478214 FGF1P05230 155 aa15.49■□□□□ 0.07
HMGA1-206ENST00000478214 CDK4P11802 303 aa15.49■□□□□ 0.07
HMGA1-206ENST00000478214 BPIP17213 487 aa15.49■□□□□ 0.07
HMGA1-206ENST00000478214 ADRA1AP35348 466 aa15.49■□□□□ 0.07
HMGA1-206ENST00000478214 GNPDA1P46926 289 aa15.49■□□□□ 0.07
HMGA1-206ENST00000478214 DUSP3P51452 185 aaPredicted RBP15.49■□□□□ 0.07
HMGA1-206ENST00000478214 GDF10P55107 478 aa15.49■□□□□ 0.07
HMGA1-206ENST00000478214 PRPSAP1Q14558 356 aa15.49■□□□□ 0.07
HMGA1-206ENST00000478214 GUSBP11Q6P575 273 aa15.49■□□□□ 0.07
HMGA1-206ENST00000478214 LVRNQ6Q4G3 990 aa15.49■□□□□ 0.07
HMGA1-206ENST00000478214 CCNI2Q6ZMN8 369 aaPredicted RBP15.49■□□□□ 0.07
HMGA1-206ENST00000478214 MARK2Q7KZI7 788 aaKnown RBP15.49■□□□□ 0.07
HMGA1-206ENST00000478214 TAF8Q7Z7C8 310 aa15.49■□□□□ 0.07
HMGA1-206ENST00000478214 SDR16C5Q8N3Y7 309 aa15.49■□□□□ 0.07
HMGA1-206ENST00000478214 BLOC1S5Q8TDH9 187 aa15.49■□□□□ 0.07
HMGA1-206ENST00000478214 C1orf54Q8WWF1 131 aa15.49■□□□□ 0.07
HMGA1-206ENST00000478214 SCG3Q8WXD2 468 aaKnown RBP15.49■□□□□ 0.07
HMGA1-206ENST00000478214 APOL2Q9BQE5 337 aa15.49■□□□□ 0.07
HMGA1-206ENST00000478214 SPATA16Q9BXB7 569 aa15.49■□□□□ 0.07
HMGA1-206ENST00000478214 TRABDQ9H4I3 376 aa15.49■□□□□ 0.07
HMGA1-206ENST00000478214 BPIFA1Q9NP55 256 aa15.49■□□□□ 0.07
HMGA1-206ENST00000478214 SIRPGQ9P1W8 387 aa15.49■□□□□ 0.07
HMGA1-206ENST00000478214 GULP1Q9UBP9 304 aa15.49■□□□□ 0.07
HMGA1-206ENST00000478214 GPR34Q9UPC5 381 aa15.49■□□□□ 0.07
HMGA1-206ENST00000478214 AAR2Q9Y312 384 aaKnown RBP15.49■□□□□ 0.07
HMGA1-206ENST00000478214 OAS3Q9Y6K5 1087 aaKnown RBP15.49■□□□□ 0.07
HMGA1-206ENST00000478214 ASPMQ8IZT6 3477 aa15.48■□□□□ 0.07
HMGA1-206ENST00000478214 CPED1A4D0V7 1026 aa15.48■□□□□ 0.07
HMGA1-206ENST00000478214 LIASO43766 372 aa15.48■□□□□ 0.07
HMGA1-206ENST00000478214 METTL18O95568 372 aa15.48■□□□□ 0.07
HMGA1-206ENST00000478214 ASMTLO95671 621 aa15.48■□□□□ 0.07
HMGA1-206ENST00000478214 ATP1A1P05023 1023 aaKnown RBP15.48■□□□□ 0.07
HMGA1-206ENST00000478214 IVLP07476 585 aa15.48■□□□□ 0.07
HMGA1-206ENST00000478214 DCDC1P59894 354 aa15.48■□□□□ 0.07
HMGA1-206ENST00000478214 NR0B2Q15466 257 aa15.48■□□□□ 0.07
HMGA1-206ENST00000478214 RANBP10Q6VN20 620 aa15.48■□□□□ 0.07
HMGA1-206ENST00000478214 ARHGEF18Q6ZSZ5 1173 aa15.48■□□□□ 0.07
HMGA1-206ENST00000478214 EFL1Q7Z2Z2 1120 aaKnown RBP15.48■□□□□ 0.07
HMGA1-206ENST00000478214 GALNT15Q8N3T1 639 aa15.48■□□□□ 0.07
HMGA1-206ENST00000478214 KYQ8NBH2 561 aa15.48■□□□□ 0.07
HMGA1-206ENST00000478214 IFI44Q8TCB0 444 aa15.48■□□□□ 0.07
HMGA1-206ENST00000478214 GATA6Q92908 595 aa15.48■□□□□ 0.07
HMGA1-206ENST00000478214 GLMNQ92990 594 aa15.48■□□□□ 0.07
HMGA1-206ENST00000478214 SCARF2Q96GP6 870 aaPredicted RBP15.48■□□□□ 0.07
HMGA1-206ENST00000478214 TMEM121BQ9BXQ6 578 aaPredicted RBP15.48■□□□□ 0.07
HMGA1-206ENST00000478214 CDH19Q9H159 772 aa15.48■□□□□ 0.07
HMGA1-206ENST00000478214 RAD18Q9NS91 495 aa15.48■□□□□ 0.07
HMGA1-206ENST00000478214 EVA1BQ9NVM1 165 aa15.48■□□□□ 0.07
HMGA1-206ENST00000478214 TRNAU1APQ9NX07 287 aaKnown RBP15.48■□□□□ 0.07
HMGA1-206ENST00000478214 NCKIPSDQ9NZQ3 722 aa15.48■□□□□ 0.07
HMGA1-206ENST00000478214 HACD3Q9P035 362 aa15.48■□□□□ 0.07
HMGA1-206ENST00000478214 NFKBIL1Q9UBC1 381 aaPredicted RBP15.48■□□□□ 0.07
HMGA1-206ENST00000478214 LRP4O75096 1905 aa15.47■□□□□ 0.07
HMGA1-206ENST00000478214 EME2A4GXA9 379 aaPredicted RBP15.47■□□□□ 0.07
HMGA1-206ENST00000478214 C1QTNF9BB2RNN3 333 aa15.47■□□□□ 0.07
HMGA1-206ENST00000478214 BUD23O43709 281 aaKnown RBP15.47■□□□□ 0.07
HMGA1-206ENST00000478214 USP12O75317 370 aa15.47■□□□□ 0.07
HMGA1-206ENST00000478214 C1QTNF9P0C862 333 aa15.47■□□□□ 0.07
HMGA1-206ENST00000478214 AK4P27144 223 aaPredicted RBP15.47■□□□□ 0.07
HMGA1-206ENST00000478214 HMGCLP35914 325 aa15.47■□□□□ 0.07
HMGA1-206ENST00000478214 ADCY8P40145 1251 aa15.47■□□□□ 0.07
HMGA1-206ENST00000478214 RPIAP49247 311 aa15.47■□□□□ 0.07
HMGA1-206ENST00000478214 E2F1Q01094 437 aa15.47■□□□□ 0.07
HMGA1-206ENST00000478214 INSM1Q01101 510 aaPredicted RBP15.47■□□□□ 0.07
HMGA1-206ENST00000478214 SPARCL1Q14515 664 aa15.47■□□□□ 0.07
HMGA1-206ENST00000478214 SIX1Q15475 284 aaPredicted RBP15.47■□□□□ 0.07
HMGA1-206ENST00000478214 OASLQ15646 514 aaKnown RBP15.47■□□□□ 0.07
HMGA1-206ENST00000478214 PARP6Q2NL67 630 aa15.47■□□□□ 0.07
HMGA1-206ENST00000478214 ZNF569Q5MCW4 686 aa15.47■□□□□ 0.07
HMGA1-206ENST00000478214 HES3Q5TGS1 186 aa15.47■□□□□ 0.07
HMGA1-206ENST00000478214 GLT6D1Q7Z4J2 308 aa15.47■□□□□ 0.07
HMGA1-206ENST00000478214 TMPRSS12Q86WS5 348 aa15.47■□□□□ 0.07
HMGA1-206ENST00000478214 NRROSQ86YC3 692 aa15.47■□□□□ 0.07
HMGA1-206ENST00000478214 SFTPA2Q8IWL1 248 aa15.47■□□□□ 0.07
HMGA1-206ENST00000478214 REXO1L1PQ8IX06 675 aa15.47■□□□□ 0.07
HMGA1-206ENST00000478214 KLHDC8BQ8IXV7 354 aa15.47■□□□□ 0.07
HMGA1-206ENST00000478214 TAB3Q8N5C8 712 aaPredicted RBP15.47■□□□□ 0.07
HMGA1-206ENST00000478214 TRAM1L1Q8N609 369 aa15.47■□□□□ 0.07
HMGA1-206ENST00000478214 ARL10Q8N8L6 244 aa15.47■□□□□ 0.07
HMGA1-206ENST00000478214 FAM46DQ8NEK8 389 aa15.47■□□□□ 0.07
HMGA1-206ENST00000478214 GPBAR1Q8TDU6 330 aa15.47■□□□□ 0.07
HMGA1-206ENST00000478214 ANP32BQ92688 251 aaKnown RBP15.47■□□□□ 0.07
HMGA1-206ENST00000478214 PDLIM2Q96JY6 352 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms