RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 GDE1Q9NZC3 331 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 MARCH4Q9P2E8 410 aaPredicted RBP7.91□□□□□ -1.14
VMA21-203ENST00000477649 NFKBIL1Q9UBC1 381 aaPredicted RBP7.91□□□□□ -1.14
VMA21-203ENST00000477649 HECAQ9UBI9 543 aaPredicted RBP7.91□□□□□ -1.14
VMA21-203ENST00000477649 INTS6Q9UL03 887 aaKnown RBP7.91□□□□□ -1.14
VMA21-203ENST00000477649 STK38LQ9Y2H1 464 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 SLC27A6Q9Y2P4 619 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 KCTD3Q9Y597 815 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 PTPRSQ13332 1948 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 OBSL1O75147 1896 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 TRBV5-4A0A0C4DH59 114 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 TSPAN11A1L157 253 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.9□□□□□ -1.14
VMA21-203ENST00000477649 NEDD8-MDP1E9PL57 170 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 STX16-NPEPL1H3BU86 382 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 MATN2O00339 956 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 STX16O14662 325 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 ITM2AO43736 263 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 KERAO60938 352 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 RFPL2O75678 378 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 TOP3BO95985 862 aaKnown RBP7.9□□□□□ -1.14
VMA21-203ENST00000477649 MT-CO1P00395 513 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 CA3P07451 260 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 SBK3P0C264 359 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 ESRRAP11474 423 aaPredicted RBP7.9□□□□□ -1.14
VMA21-203ENST00000477649 CD1DP15813 335 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 TFEBP19484 476 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 IRS1P35568 1242 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 SPAM1P38567 509 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 ABCG1P45844 678 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 RGS4P49798 205 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 NAGLUP54802 743 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 CDKN2DP55273 166 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 IL2P60568 153 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 ST8SIA6P61647 398 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 XIAPP98170 497 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 CDC16Q13042 620 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 PDGFRLQ15198 375 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 SMAD1Q15797 465 aaKnown RBP7.9□□□□□ -1.14
VMA21-203ENST00000477649 PTPRNQ16849 979 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 SLC5A9Q2M3M2 681 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 CTC1Q2NKJ3 1217 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 FUT11Q495W5 492 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 TTC31Q49AM3 519 aaPredicted RBP7.9□□□□□ -1.14
VMA21-203ENST00000477649 DNAL1Q4LDG9 190 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 ZRANB3Q5FWF4 1079 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 ARL13AQ5H913 290 aaPredicted RBP7.9□□□□□ -1.14
VMA21-203ENST00000477649 DGKKQ5KSL6 1271 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 ATXN7L2Q5T6C5 722 aaPredicted RBP7.9□□□□□ -1.14
VMA21-203ENST00000477649 TTC23LQ6PF05 361 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 EPGNQ6UW88 154 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 TREML4Q6UXN2 200 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 TRIM67Q6ZTA4 783 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 EFL1Q7Z2Z2 1120 aaKnown RBP7.9□□□□□ -1.14
VMA21-203ENST00000477649 GRASPQ7Z6J2 395 aaPredicted RBP7.9□□□□□ -1.14
VMA21-203ENST00000477649 ISCA2Q86U28 154 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 TMEM25Q86YD3 366 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 CAMK1DQ8IU85 385 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 RYBPQ8N488 228 aaPredicted RBP7.9□□□□□ -1.14
VMA21-203ENST00000477649 MAGEC3Q8TD91 643 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 TCEAL4Q96EI5 215 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 NDNQ99608 321 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 HEPHQ9BQS7 1158 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 BTBD10Q9BSF8 475 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 TM6SF2Q9BZW4 377 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 C20orf27Q9GZN8 174 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 CLPBQ9H078 707 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 C1orf21Q9H246 121 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 SUDS3Q9H7L9 328 aaPredicted RBP7.9□□□□□ -1.14
VMA21-203ENST00000477649 SLC40A1Q9NP59 571 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 DUS2Q9NX74 493 aaKnown RBP7.9□□□□□ -1.14
VMA21-203ENST00000477649 CPSF2Q9P2I0 782 aaKnown RBP7.9□□□□□ -1.14
VMA21-203ENST00000477649 DKK3Q9UBP4 350 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 EVLQ9UI08 416 aaPredicted RBP7.9□□□□□ -1.14
VMA21-203ENST00000477649 TAGLN3Q9UI15 199 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 FKBPLQ9UIM3 349 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 MSRAQ9UJ68 235 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 TRMT6Q9UJA5 497 aaKnown RBP7.9□□□□□ -1.14
VMA21-203ENST00000477649 GNPTGQ9UJJ9 305 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 CRYL1Q9Y2S2 319 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 ACTL7AQ9Y615 435 aa7.9□□□□□ -1.14
VMA21-203ENST00000477649 KIAA0100Q14667 2235 aaKnown RBP7.9□□□□□ -1.15
VMA21-203ENST00000477649 MIA3Q5JRA6 1907 aa7.9□□□□□ -1.15
VMA21-203ENST00000477649 MTCL1Q9Y4B5 1905 aaKnown RBP7.9□□□□□ -1.15
VMA21-203ENST00000477649 GLYATL1P3A0A0U1RQE8 302 aa7.89□□□□□ -1.15
VMA21-203ENST00000477649 C1orf232A0A0U1RR37 186 aa7.89□□□□□ -1.15
VMA21-203ENST00000477649 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.89□□□□□ -1.15
VMA21-203ENST00000477649 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.89□□□□□ -1.15
VMA21-203ENST00000477649 UBA6A0AVT1 1052 aaPredicted RBP7.89□□□□□ -1.15
VMA21-203ENST00000477649 OR51F1A6NGY5 319 aa7.89□□□□□ -1.15
VMA21-203ENST00000477649 A8MT66 165 aa7.89□□□□□ -1.15
VMA21-203ENST00000477649 AGAP14A8MT82 685 aa7.89□□□□□ -1.15
VMA21-203ENST00000477649 CAPN14A8MX76 684 aa7.89□□□□□ -1.15
VMA21-203ENST00000477649 E5RI56 91 aa7.89□□□□□ -1.15
VMA21-203ENST00000477649 ANKRD65E5RJM6 399 aa7.89□□□□□ -1.15
VMA21-203ENST00000477649 SPECC1L-ADORA2AF8WAN1 911 aa7.89□□□□□ -1.15
VMA21-203ENST00000477649 K7ERQ8 282 aa7.89□□□□□ -1.15
VMA21-203ENST00000477649 QSOX1O00391 747 aa7.89□□□□□ -1.15
VMA21-203ENST00000477649 ZNF195O14628 629 aa7.89□□□□□ -1.15
VMA21-203ENST00000477649 AURKAO14965 403 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms