RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	ZYX	Q15942	572 aa	Known RBP	4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	CRY1	Q16526	586 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	MGAT5B	Q3V5L5	792 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	SUPT20HL1	Q3ZLR7	823 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	AARS2	Q5JTZ9	985 aa	Known RBP	4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	RBM48	Q5RL73	367 aa	Known RBP	4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	CCNYL2	Q5T2Q4	361 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	C6orf52	Q5T4I8	152 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	BROX	Q5VW32	411 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	CYP4F22	Q6NT55	531 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	ZNF773	Q6PK81	442 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	CD300LD	Q6UXZ3	194 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	TIFAB	Q6ZNK6	161 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	CYS1	Q717R9	158 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	PRSS48	Q7RTY5	328 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	PLCZ1	Q86YW0	608 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	LIX1L	Q8IVB5	337 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	HERC6	Q8IVU3	1022 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	ARID3B	Q8IVW6	561 aa	Predicted RBP	4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	MAPKAPK5	Q8IW41	473 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	SLITRK4	Q8IW52	837 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	TBC1D21	Q8IYX1	336 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	RCOR2	Q8IZ40	523 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	UNC5B	Q8IZJ1	945 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	DEFB107A	Q8IZN7	70 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	C4orf33	Q8N1A6	199 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	CNTD1	Q8N815	330 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	OR13F1	Q8NGS4	319 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	ENKUR	Q8TC29	256 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	ZNF384	Q8TF68	577 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	PHF10	Q8WUB8	498 aa	Known RBP	4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	TGFBRAP1	Q8WUH2	860 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	TMEM174	Q8WUU8	243 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	FAM151A	Q8WW52	585 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	SLC44A1	Q8WWI5	657 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	SEPT8	Q92599	483 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	POP5	Q969H6	163 aa	Known RBP	4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	LRRC39	Q96DD0	335 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	MBD6	Q96DN6	1003 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	ASB9	Q96DX5	294 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	ZBED3	Q96IU2	234 aa	Predicted RBP	4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	TNIP3	Q96KP6	325 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	SPATA17	Q96L03	361 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	C9orf72	Q96LT7	481 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	RIPOR3	Q96MK2	946 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	DEPDC7	Q96QD5	511 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	PTPN18	Q99952	460 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	HERC2P3	Q9BVR0	1158 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	KIFC1	Q9BW19	673 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	ACAT2	Q9BWD1	397 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	IDI2	Q9BXS1	227 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	TEX13B	Q9BXU2	312 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	MRPL9	Q9BYD2	267 aa	Known RBP	4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	B3GNT4	Q9C0J1	378 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	THAP2	Q9H0W7	228 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	GLT8D2	Q9H1C3	349 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	UPF3A	Q9H1J1	476 aa	Known RBP	4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	OR51B5	Q9H339	312 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	MUC13	Q9H3R2	512 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	DPEP3	Q9H4B8	488 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	SMYD3	Q9H7B4	428 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	TDRD3	Q9H7E2	651 aa	Known RBP	4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	ARMT1	Q9H993	441 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	NANOG	Q9H9S0	305 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	EFCAB1	Q9HAE3	211 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	SIAE	Q9HAT2	523 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	SCPEP1	Q9HB40	452 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	FANCE	Q9HB96	536 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	IFT122	Q9HBG6	1241 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	PCDH9	Q9HC56	1237 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	SIX2	Q9NPC8	291 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	BLOC1S4	Q9NUP1	217 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	DNAJC17	Q9NVM6	304 aa	Known RBP	4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	BARHL2	Q9NY43	387 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	SNTG2	Q9NY99	539 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	TAS2R7	Q9NYW3	318 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	APEX2	Q9UBZ4	518 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	GLS2	Q9UI32	602 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	MID2	Q9UJV3	735 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	MAFF	Q9ULX9	164 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	PLLP	Q9Y342	182 aa		4.72	□□□□□ -1.65
PTCD3-212	ENST00000477520	MYH11	P35749	1972 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520		A0A1W2PPM1	405 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520		A0A1W2PPW3	197 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	GOLGA8J	A6NMD2	632 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	OR5K4	A6NMS3	321 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	MEI4	A8MW99	385 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	FOXO6	A8MYZ6	492 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	HNRNPCL2	B2RXH8	293 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	TCP10L2	B9ZVM9	353 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	EEF2K	O00418	725 aa	Known RBP	4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	SLC9A3R1	O14745	358 aa	Predicted RBP	4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	AURKA	O14965	403 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	PHGDH	O43175	533 aa	Known RBP	4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	NDUFA2	O43678	99 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	KCNJ13	O60928	360 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	ZNF254	O75437	659 aa		4.71	□□□□□ -1.66
PTCD3-212	ENST00000477520	TOM1L1	O75674	476 aa		4.71	□□□□□ -1.66

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