RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 BTLAQ7Z6A9 289 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 PROSER1Q86XN7 944 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 SCUBE3Q8IX30 993 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 SCML4Q8N228 414 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 OR9I1Q8NGQ6 314 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 C19orf60Q96EN9 201 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 MUS81Q96NY9 551 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 ASB2Q96Q27 587 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 KATNAL1Q9BW62 490 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 PCDHA9Q9Y5H5 950 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 NRCAMQ92823 1304 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 A8MT66 165 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 LACTBL1A8MY62 500 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 CENPBD1B2RD01 187 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 USP12O75317 370 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 TULP3O75386 442 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 GJB1P08034 283 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 SLC6A2P23975 617 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 NMBRP28336 390 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 SHMT2P34897 504 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 ARSFP54793 590 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 SLC12A2P55011 1212 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 OSTNP61366 133 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 RBP5P82980 135 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 BEX3Q00994 111 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 MFSD10Q14728 455 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 ARHGAP17Q68EM7 881 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 AGMOQ6ZNB7 445 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 R3HCC1LQ7Z5L2 792 aaKnown RBP15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 NT5DC4Q86YG4 428 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 CCDC117Q8IWD4 279 aaPredicted RBP15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 LRRC58Q96CX6 371 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 HOXD1Q9GZZ0 328 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 SCUBE2Q9NQ36 999 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 CHRAC1Q9NRG0 131 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 DKK3Q9UBP4 350 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 DGKBQ9Y6T7 804 aa15.21■□□□□ 0.03
CLSTN1-205ENST00000477264 INO80B-WBP1J3KQ70 363 aa15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 DCLK1O15075 740 aa15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 AHSGP02765 367 aa15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 BMP1P13497 986 aa15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 CD40LGP29965 261 aa15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 RPL34P49207 117 aaKnown RBP15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 ATXN1P54253 815 aaKnown RBP15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 ECT2LQ008S8 904 aa15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 BST2Q10589 180 aaKnown RBP15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 POLD3Q15054 466 aaPredicted RBP15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 CTF1Q16619 201 aa15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 EEF1DP3Q658K8 133 aa15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 TRPV1Q8NER1 839 aa15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 OR7A2PQ8NGA2 310 aa15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 LILRB4Q8NHJ6 448 aa15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 CD99L2Q8TCZ2 262 aa15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 CALML6Q8TD86 181 aa15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 BPIFB1Q8TDL5 484 aa15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 HEXDCQ8WVB3 486 aa15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 HDAC11Q96DB2 347 aa15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 SLC30A3Q99726 388 aa15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 KCTD14Q9BQ13 255 aaPredicted RBP15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 ALG2Q9H553 416 aa15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 GMPR2Q9P2T1 348 aaKnown RBP15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 PDE10AQ9Y233 779 aa15.21■□□□□ 0.02
CLSTN1-205ENST00000477264 TSC2P49815 1807 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 ILVBLA1L0T0 632 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 SEPT4O43236 478 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 TBC1D4O60343 1298 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 PRSS23O95084 383 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 PARNO95453 639 aaKnown RBP15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 F7P08709 466 aaPredicted RBP15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 SMIM10L2AP0DMW4 78 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 SMIM10L2BP0DMW5 78 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 HTR1BP28222 390 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 NOS2P35228 1153 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 MRPL19P49406 292 aaKnown RBP15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 PSEN2P49810 448 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 POU5F1BQ06416 359 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 OLIG2Q13516 323 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 TMEM132DQ14C87 1099 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 ACOX1Q15067 660 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 SF3B4Q15427 424 aaKnown RBP eCLIP15.2■□□□□ 0.025e-7■■□□□ 14.3
CLSTN1-205ENST00000477264 ATAD3BQ5T9A4 648 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 UGT3A1Q6NUS8 523 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 PRSS48Q7RTY5 328 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 KLHDC8BQ8IXV7 354 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 PYROXD2Q8N2H3 581 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 OR6Q1Q8NGQ2 317 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 ZFP90Q8TF47 636 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 TMEM125Q96AQ2 219 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 ZNF668Q96K58 619 aaPredicted RBP15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 OMDQ99983 421 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 FEM1AQ9BSK4 669 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 MLPHQ9BV36 600 aaPredicted RBP15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 NFKBIZQ9BYH8 718 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 ADNPQ9H2P0 1102 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 SIAEQ9HAT2 523 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 SRRDQ9UH36 339 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 ZNF229Q9UJW7 825 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 POU2F3Q9UKI9 436 aa15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 RBMX2Q9Y388 322 aaKnown RBP15.2■□□□□ 0.02
CLSTN1-205ENST00000477264 PCDHGA11Q9Y5H2 935 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms