RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 CDK5R2Q13319 367 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 RFTN1Q14699 578 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-214ENST00000477152 C15orf59Q2T9L4 293 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-214ENST00000477152 Q6ZS46 218 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 PHF13Q86YI8 300 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-214ENST00000477152 SLC35F3Q8IY50 421 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 ARMC10Q8N2F6 343 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 TAB3Q8N5C8 712 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-214ENST00000477152 CCDC112Q8NEF3 446 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 OR6K2Q8NGY2 324 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 ENOX1Q8TC92 643 aaKnown RBP7.29□□□□□ -1.24
BRCA1-214ENST00000477152 NSMCE1Q8WV22 266 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 APOOQ9BUR5 198 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 LRRC61Q9BV99 259 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 LGR4Q9BXB1 951 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 B3GNT4Q9C0J1 378 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 CPNE5Q9HCH3 593 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 AJAP1Q9UKB5 411 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-214ENST00000477152 FASNP49327 2511 aaKnown RBP7.29□□□□□ -1.24
BRCA1-214ENST00000477152 LY6G6EA0A0G2JKS1 128 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-214ENST00000477152 I6L893 689 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-214ENST00000477152 RGS13O14921 159 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 ITGB2P05107 769 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 HOXC4P09017 264 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-214ENST00000477152 CCKBRP32239 447 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 NOP2P46087 812 aaKnown RBP7.29□□□□□ -1.24
BRCA1-214ENST00000477152 BCL2L1Q07817 233 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 C1orf61Q13536 156 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 TCEAL1Q15170 157 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 IRF4Q15306 451 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 UGP2Q16851 508 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 ATXN7L2Q5T6C5 722 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-214ENST00000477152 RD3Q7Z3Z2 195 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 TAF8Q7Z7C8 310 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 RBFAQ8N0V3 343 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 UMODL1-AS1Q8N2C9 162 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 TP53I13Q8NBR0 393 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-214ENST00000477152 FAM46AQ96IP4 442 aaKnown RBP7.29□□□□□ -1.24
BRCA1-214ENST00000477152 DPYSL5Q9BPU6 564 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 CNPY3Q9BT09 278 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 WRAP53Q9BUR4 548 aaKnown RBP7.29□□□□□ -1.24
BRCA1-214ENST00000477152 CINPQ9BW66 212 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-214ENST00000477152 VPS16Q9H269 839 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 LRRN3Q9H3W5 708 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 SP110Q9HB58 689 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 TAB2Q9NYJ8 693 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 NOCTQ9UK39 431 aaKnown RBP7.29□□□□□ -1.24
BRCA1-214ENST00000477152 ATP8A1Q9Y2Q0 1164 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 DGKBQ9Y6T7 804 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 U3KQA8 63 aa7.29□□□□□ -1.24
BRCA1-214ENST00000477152 ITPR1Q14643 2758 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 IGSF10Q6WRI0 2623 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 NTN3O00634 580 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-214ENST00000477152 NVLO15381 856 aaKnown RBP7.28□□□□□ -1.24
BRCA1-214ENST00000477152 PALMO75781 387 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 C1QL1O75973 258 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 CD160O95971 181 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 RPLP0P05388 317 aaKnown RBP7.28□□□□□ -1.24
BRCA1-214ENST00000477152 ELFN1P0C7U0 828 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 LIPCP11150 499 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 UNGP13051 313 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-214ENST00000477152 MYF5P13349 255 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 FERP16591 822 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 GKP32189 559 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 HSPA9P38646 679 aaKnown RBP7.28□□□□□ -1.24
BRCA1-214ENST00000477152 CHRNA4P43681 627 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 HDAC4P56524 1084 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 KIAA1024LP59773 190 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 FMO1Q01740 532 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 NSUN2Q08J23 767 aaKnown RBP eCLIP7.28□□□□□ -1.24
BRCA1-214ENST00000477152 CLEC16AQ2KHT3 1053 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 DPCR1Q3MIW9 517 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 C2CD6Q53TS8 623 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 MANEAQ5SRI9 462 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 WDR59Q6PJI9 974 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 SASS6Q6UVJ0 657 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 LZTR1Q8N653 840 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 OR56A4Q8NGH8 313 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 SLC30A5Q8TAD4 765 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 GPT2Q8TD30 523 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 SGF29Q96ES7 293 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 GSDMCQ9BYG8 508 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 CLMPQ9H6B4 373 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 NLRC4Q9NPP4 1024 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 PHPT1Q9NRX4 125 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-214ENST00000477152 FAM207AQ9NSI2 230 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-214ENST00000477152 APPL1Q9UKG1 709 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 ACSL6Q9UKU0 697 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 FZD10Q9ULW2 581 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 ITM2BQ9Y287 266 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 ZFHX4Q86UP3 3567 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 TSPAN11A1L157 253 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 D6RAR5 112 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 GOLGA6L22H0YM25 854 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 EEF2KO00418 725 aaKnown RBP7.28□□□□□ -1.24
BRCA1-214ENST00000477152 GCATO75600 419 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 PCCBP05166 539 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 PYGLP06737 847 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 CYP2A6P11509 494 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms