RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 TSPAN8P19075 237 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 HDCP19113 662 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 TTPAP49638 278 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 ATP6V0D1P61421 351 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 ATXN7L2Q5T6C5 722 aaPredicted RBP11.44□□□□□ -0.58
NUP188-205ENST00000477069 KBTBD6Q86V97 674 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 PIH1D2Q8WWB5 315 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 TMA16Q96EY4 203 aaKnown RBP11.44□□□□□ -0.58
NUP188-205ENST00000477069 C1QTNF3Q9BXJ4 246 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 P2RY12Q9H244 342 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.44□□□□□ -0.58
NUP188-205ENST00000477069 MRGBPQ9NV56 204 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 IL17CQ9P0M4 197 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 FAM50BQ9Y247 325 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 VPS9D1Q9Y2B5 631 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 ZNF711Q9Y462 761 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 MKI67P46013 3256 aaKnown RBP11.44□□□□□ -0.58
NUP188-205ENST00000477069 A0A0U1RQS6 177 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 K7ERQ8 282 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 PPP6CO00743 305 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 OR1I1O60431 355 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 PKMP14618 531 aaKnown RBP11.44□□□□□ -0.58
NUP188-205ENST00000477069 RHOAP61586 193 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 SLC7A9P82251 487 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 PTPRNQ16849 979 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 PABPC1LQ4VXU2 614 aaKnown RBP11.44□□□□□ -0.58
NUP188-205ENST00000477069 APCDD1Q8J025 514 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 CPXM2Q8N436 756 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 RYBPQ8N488 228 aaPredicted RBP11.44□□□□□ -0.58
NUP188-205ENST00000477069 GRIN3AQ8TCU5 1115 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 CD200R1Q8TD46 325 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 PYDC1Q8WXC3 89 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 FUBP1Q96AE4 644 aaKnown RBP11.44□□□□□ -0.58
NUP188-205ENST00000477069 CCDC124Q96CT7 223 aaKnown RBP11.44□□□□□ -0.58
NUP188-205ENST00000477069 C3orf30Q96M34 536 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 MAGEE1Q9HCI5 957 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 BPIFA1Q9NP55 256 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 NDE1Q9NXR1 346 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 ASB3Q9Y575 518 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 DNAJC15Q9Y5T4 150 aa11.44□□□□□ -0.58
NUP188-205ENST00000477069 CARNS1A5YM72 827 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 TGM5O43548 720 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 ECI2O75521 394 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 PGLSO95336 258 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 RPS17P08708 135 aaKnown RBP11.43□□□□□ -0.58
NUP188-205ENST00000477069 BMP1P13497 986 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 ATP4BP51164 291 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 CDH13P55290 713 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 AP1S1P61966 158 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 CYP4F8P98187 520 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 RAD51Q06609 339 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 CDH18Q13634 790 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 PFKFB4Q16877 469 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 ANO7Q6IWH7 933 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 BNC2Q6ZN30 1099 aaPredicted RBP11.43□□□□□ -0.58
NUP188-205ENST00000477069 GK5Q6ZS86 529 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 HTR3DQ70Z44 454 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 PHYKPLQ8IUZ5 450 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 CLYBLQ8N0X4 340 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 EFHBQ8N7U6 833 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 STAG3L4Q8TBR4 150 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 EXT2Q93063 718 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 C19orf60Q96EN9 201 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 NSUN5Q96P11 429 aaKnown RBP11.43□□□□□ -0.58
NUP188-205ENST00000477069 SARDHQ9UL12 918 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 PLXNB3Q9ULL4 1909 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 GAPDHSO14556 408 aaPredicted RBP11.43□□□□□ -0.58
NUP188-205ENST00000477069 LIN7AO14910 233 aaPredicted RBP11.43□□□□□ -0.58
NUP188-205ENST00000477069 NIPSNAP2O75323 286 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 ZNF821O75541 412 aaPredicted RBP11.43□□□□□ -0.58
NUP188-205ENST00000477069 SPATA31D3P0C874 917 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 HMGCLP35914 325 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 THOP1P52888 689 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 CLNS1AP54105 237 aaKnown RBP11.43□□□□□ -0.58
NUP188-205ENST00000477069 FOXA1P55317 472 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 CEACAM7Q14002 265 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 CDKN3Q16667 212 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 SPATA31D4Q6ZUB0 917 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 DHDDSQ86SQ9 333 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 NKAPQ8N5F7 415 aaKnown RBP11.43□□□□□ -0.58
NUP188-205ENST00000477069 MYO19Q96H55 970 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 WDR41Q9HAD4 459 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 EFCAB1Q9HAE3 211 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 BATF3Q9NR55 127 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 UTP6Q9NYH9 597 aaKnown RBP11.43□□□□□ -0.58
NUP188-205ENST00000477069 CLEC4EQ9ULY5 219 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 PCDHB9Q9Y5E1 797 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 COMMD10Q9Y6G5 202 aa11.43□□□□□ -0.58
NUP188-205ENST00000477069 TYW5A2RUC4 315 aaKnown RBP11.42□□□□□ -0.58
NUP188-205ENST00000477069 STX16-NPEPL1H3BU86 382 aa11.42□□□□□ -0.58
NUP188-205ENST00000477069 CDC7O00311 574 aa11.42□□□□□ -0.58
NUP188-205ENST00000477069 FBP2O00757 339 aa11.42□□□□□ -0.58
NUP188-205ENST00000477069 STX16O14662 325 aa11.42□□□□□ -0.58
NUP188-205ENST00000477069 UBDO15205 165 aa11.42□□□□□ -0.58
NUP188-205ENST00000477069 STX7O15400 261 aaKnown RBP11.42□□□□□ -0.58
NUP188-205ENST00000477069 MAP3K7O43318 606 aa11.42□□□□□ -0.58
NUP188-205ENST00000477069 HTRA2O43464 458 aaPredicted RBP11.42□□□□□ -0.58
NUP188-205ENST00000477069 SMAD6O43541 496 aaKnown RBP11.42□□□□□ -0.58
NUP188-205ENST00000477069 CLASP2O75122 1294 aaKnown RBP11.42□□□□□ -0.58
NUP188-205ENST00000477069 CNPP09543 421 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms