RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 KDELC2Q7Z4H8 507 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 ZNF438Q7Z4V0 828 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 KCTD6Q8NC69 237 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 ARRDC2Q8TBH0 407 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 ZNF564Q8TBZ8 553 aaPredicted RBP11.6□□□□□ -0.55
VARS2-208ENST00000477052 HTR3CQ8WXA8 447 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 ART4Q93070 314 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 SGF29Q96ES7 293 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 WDR24Q96S15 920 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 CEP41Q9BYV8 373 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 BRD8Q9H0E9 1235 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 OCIAD1Q9NX40 245 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 ZNHIT2Q9UHR6 403 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 ACSL6Q9UKU0 697 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 PPIL1Q9Y3C6 166 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 PCDHGA4Q9Y5G9 962 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 SDK2Q58EX2 2172 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 IGHV1OR21-1A0A087WYE8 117 aa11.59□□□□□ -0.55
VARS2-208ENST00000477052 A0A1W2PQ67 120 aa11.59□□□□□ -0.55
VARS2-208ENST00000477052 MYO1FO00160 1098 aa11.59□□□□□ -0.55
VARS2-208ENST00000477052 PSMD11O00231 422 aa11.59□□□□□ -0.55
VARS2-208ENST00000477052 MATN3O15232 486 aa11.59□□□□□ -0.55
VARS2-208ENST00000477052 STC1P52823 247 aa11.59□□□□□ -0.55
VARS2-208ENST00000477052 DPTQ07507 201 aa11.59□□□□□ -0.55
VARS2-208ENST00000477052 NFATC2Q13469 925 aa11.59□□□□□ -0.55
VARS2-208ENST00000477052 FIGNQ5HY92 759 aa11.59□□□□□ -0.55
VARS2-208ENST00000477052 CHST15Q7LFX5 561 aaPredicted RBP11.59□□□□□ -0.55
VARS2-208ENST00000477052 DTX1Q86Y01 620 aa11.59□□□□□ -0.55
VARS2-208ENST00000477052 PQLC3Q8N755 202 aa11.59□□□□□ -0.55
VARS2-208ENST00000477052 CCNYQ8ND76 341 aa11.59□□□□□ -0.55
VARS2-208ENST00000477052 FAM71BQ8TC56 605 aa11.59□□□□□ -0.55
VARS2-208ENST00000477052 SLC37A2Q8TED4 501 aa11.59□□□□□ -0.55
VARS2-208ENST00000477052 ARHGAP9Q9BRR9 750 aa11.59□□□□□ -0.55
VARS2-208ENST00000477052 POLR1EQ9GZS1 481 aaKnown RBP11.59□□□□□ -0.55
VARS2-208ENST00000477052 ZMYND15Q9H091 742 aa11.59□□□□□ -0.55
VARS2-208ENST00000477052 CDH19Q9H159 772 aa11.59□□□□□ -0.55
VARS2-208ENST00000477052 KCNK4Q9NYG8 393 aa11.59□□□□□ -0.55
VARS2-208ENST00000477052 CTTNBP2NLQ9P2B4 639 aa11.59□□□□□ -0.55
VARS2-208ENST00000477052 CNOT6Q9ULM6 557 aaKnown RBP11.59□□□□□ -0.55
VARS2-208ENST00000477052 KCNK6Q9Y257 313 aa11.59□□□□□ -0.55
VARS2-208ENST00000477052 B3GALT1Q9Y5Z6 326 aa11.59□□□□□ -0.55
VARS2-208ENST00000477052 BOD1L1Q8NFC6 3051 aa11.58□□□□□ -0.55
VARS2-208ENST00000477052 ASH1LQ9NR48 2969 aaKnown RBP11.58□□□□□ -0.55
VARS2-208ENST00000477052 A0A1W2PQJ5 194 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 CAPN8A6NHC0 703 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 CYSRT1A8MQ03 144 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 FADS2P1A8MWK0 482 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 KCNK1O00180 336 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 SNX2O60749 519 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 JCHAINP01591 159 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 SLC4A1P02730 911 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 GYPCP04921 128 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 MMP2P08253 660 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 PIRTP0C851 137 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 NFKBIAP25963 317 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 CASP14P31944 242 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 CD86P42081 329 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 MAPK9P45984 424 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 LIMK2P53671 638 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 ZBED6P86452 979 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 GALNT3Q14435 633 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 NR1D2Q14995 579 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 CLCA4Q14CN2 919 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 PAFAH1B3Q15102 231 aaKnown RBP11.58□□□□□ -0.56
VARS2-208ENST00000477052 TBR1Q16650 682 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 HADHQ16836 314 aaKnown RBP11.58□□□□□ -0.56
VARS2-208ENST00000477052 SKOR2Q2VWA4 1001 aaPredicted RBP11.58□□□□□ -0.56
VARS2-208ENST00000477052 RALGPS1Q5JS13 557 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 ZFYVE27Q5T4F4 411 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 FAM129CQ86XR2 697 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 GALNT13Q8IUC8 556 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 RAPGEF5Q92565 580 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 MAML1Q92585 1016 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 TMEM159Q96B96 161 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 SCARF2Q96GP6 870 aaPredicted RBP11.58□□□□□ -0.56
VARS2-208ENST00000477052 CTRCQ99895 268 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 TDRD1Q9BXT4 1180 aaKnown RBP11.58□□□□□ -0.56
VARS2-208ENST00000477052 PCDH9Q9HC56 1237 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 DTLQ9NZJ0 730 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 SEPT10Q9P0V9 454 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 IFNKQ9P0W0 207 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 TBC1D29Q9UFV1 150 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 KLHL3Q9UH77 587 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 CAPN11Q9UMQ6 739 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 PCDHB11Q9Y5F2 797 aa11.58□□□□□ -0.56
VARS2-208ENST00000477052 BZW2Q9Y6E2 419 aaKnown RBP11.58□□□□□ -0.56
VARS2-208ENST00000477052 C1orf232A0A0U1RR37 186 aa11.57□□□□□ -0.56
VARS2-208ENST00000477052 EFCAB7A8K855 629 aa11.57□□□□□ -0.56
VARS2-208ENST00000477052 DNAJC6O75061 913 aa11.57□□□□□ -0.56
VARS2-208ENST00000477052 PROSCO94903 275 aa11.57□□□□□ -0.56
VARS2-208ENST00000477052 ACP5P13686 325 aa11.57□□□□□ -0.56
VARS2-208ENST00000477052 TEAD1P28347 426 aa11.57□□□□□ -0.56
VARS2-208ENST00000477052 ZBTB17Q13105 803 aa11.57□□□□□ -0.56
VARS2-208ENST00000477052 IFI16Q16666 785 aaKnown RBP11.57□□□□□ -0.56
VARS2-208ENST00000477052 QPCTQ16769 361 aa11.57□□□□□ -0.56
VARS2-208ENST00000477052 ALS2CLQ60I27 953 aa11.57□□□□□ -0.56
VARS2-208ENST00000477052 ANKS6Q68DC2 871 aa11.57□□□□□ -0.56
VARS2-208ENST00000477052 NPNTQ6UXI9 565 aa11.57□□□□□ -0.56
VARS2-208ENST00000477052 NRSN1Q8IZ57 195 aa11.57□□□□□ -0.56
VARS2-208ENST00000477052 CNTD1Q8N815 330 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms