RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 C6orf15Q6UXA7 325 aaPredicted RBP11.29□□□□□ -0.6
BRCA1-213ENST00000476777 TECPR1Q7Z6L1 1165 aa11.29□□□□□ -0.6
BRCA1-213ENST00000476777 ARHGAP12Q8IWW6 846 aa11.29□□□□□ -0.6
BRCA1-213ENST00000476777 FNIP1Q8TF40 1166 aa11.29□□□□□ -0.6
BRCA1-213ENST00000476777 RNF31Q96EP0 1072 aa11.29□□□□□ -0.6
BRCA1-213ENST00000476777 PSKH2Q96QS6 385 aa11.29□□□□□ -0.6
BRCA1-213ENST00000476777 SELENOOQ9BVL4 669 aa11.29□□□□□ -0.6
BRCA1-213ENST00000476777 KLHL3Q9UH77 587 aa11.29□□□□□ -0.6
BRCA1-213ENST00000476777 MAP4K5Q9Y4K4 846 aa11.29□□□□□ -0.6
BRCA1-213ENST00000476777 PCDHGC4Q9Y5F7 938 aa11.29□□□□□ -0.6
BRCA1-213ENST00000476777 ZFHX3Q15911 3703 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-213ENST00000476777 TCRBV5S1A1TA0A578 114 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 CDC14CA4D256 554 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 NPIPB15A6NHN6 443 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-213ENST00000476777 SIGLEC16A6NMB1 481 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 KATNA1O75449 491 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 DNAJB5O75953 348 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 GFPT2O94808 682 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 DDAH2O95865 285 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 ANKRD34CP0C6C1 535 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 CYP2A6P11509 494 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-213ENST00000476777 PRKCSHP14314 528 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-213ENST00000476777 TNFAIP3P21580 790 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 COL8A1P27658 744 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 DCTP40126 519 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 GPR1P46091 355 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 EPHA4P54764 986 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 FOXM1Q08050 763 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 PTPRRQ15256 657 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 IYDQ6PHW0 289 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 ADAMTSL4Q6UY14 1074 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 TRIM72Q6ZMU5 477 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 RFLNAQ6ZTI6 216 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 MARK2Q7KZI7 788 aaKnown RBP11.28□□□□□ -0.6
BRCA1-213ENST00000476777 TSPAN33Q86UF1 283 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 TRIM74Q86UV6 250 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 GALNT13Q8IUC8 556 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 APLFQ8IW19 511 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-213ENST00000476777 FAM114A1Q8IWE2 563 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 GALNT6Q8NCL4 622 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 C3orf20Q8ND61 904 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 PCDHB18PQ96TA0 734 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 TUBGCP2Q9BSJ2 902 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 TRIM55Q9BYV6 548 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 TWSG1Q9GZX9 223 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 SP110Q9HB58 689 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 ADAM22Q9P0K1 906 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 TBC1D29Q9UFV1 150 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 CD84Q9UIB8 345 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 KCND3Q9UK17 655 aa11.28□□□□□ -0.6
BRCA1-213ENST00000476777 PCYT1BQ9Y5K3 369 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-213ENST00000476777 OAS3Q9Y6K5 1087 aaKnown RBP11.28□□□□□ -0.6
BRCA1-213ENST00000476777 MN1Q10571 1320 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-213ENST00000476777 A0A0U1RQS6 177 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 A0A1W2PQ67 120 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 PIPSLA2A3N6 862 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 A6NCN8 305 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 DFFAO00273 331 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 EEF2KO00418 725 aaKnown RBP11.27□□□□□ -0.61
BRCA1-213ENST00000476777 INPP4BO15327 924 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 SOCS5O75159 536 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 CREG1O75629 220 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 SORBS2O94875 1100 aaKnown RBP11.27□□□□□ -0.61
BRCA1-213ENST00000476777 RECKO95980 971 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 CPP00450 1065 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 MAPK9P45984 424 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 NSFP46459 744 aaKnown RBP11.27□□□□□ -0.61
BRCA1-213ENST00000476777 RENBPP51606 427 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 RPL7AP62424 266 aaKnown RBP11.27□□□□□ -0.61
BRCA1-213ENST00000476777 IL10RBQ08334 325 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 SLC10A7Q0GE19 358 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 SEMA5AQ13591 1074 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 LBRQ14739 615 aaKnown RBP11.27□□□□□ -0.61
BRCA1-213ENST00000476777 NADK2Q4G0N4 442 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 MAMDC2Q7Z304 686 aaPredicted RBP11.27□□□□□ -0.61
BRCA1-213ENST00000476777 LYSMD3Q7Z3D4 306 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 PHF13Q86YI8 300 aaPredicted RBP11.27□□□□□ -0.61
BRCA1-213ENST00000476777 TICAM1Q8IUC6 712 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 PLXDC1Q8IUK5 500 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 LZTR1Q8N653 840 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 NPWQ8N729 165 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 PDCD6IPQ8WUM4 868 aaKnown RBP11.27□□□□□ -0.61
BRCA1-213ENST00000476777 SH3KBP1Q96B97 665 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 SCRN2Q96FV2 425 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 MCCC1Q96RQ3 725 aaPredicted RBP11.27□□□□□ -0.61
BRCA1-213ENST00000476777 CNPY3Q9BT09 278 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 EPB41L1Q9H4G0 881 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 GPATCH2LQ9NWQ4 482 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 KIAA1468Q9P260 1216 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 PHTF1Q9UMS5 762 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 PCDHGA6Q9Y5G7 932 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 TACC2O95359 2948 aa11.27□□□□□ -0.61
BRCA1-213ENST00000476777 SPTBP11277 2137 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 ZNF106Q9H2Y7 1883 aaKnown RBP11.26□□□□□ -0.61
BRCA1-213ENST00000476777 WIPF3A6NGB9 483 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 TCP11X1B4DZS4 312 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 DNAJC6O75061 913 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 KIAA0754O94854 1291 aa11.26□□□□□ -0.61
BRCA1-213ENST00000476777 CLDN1O95832 211 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms