RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 SHCBP1LQ9BZQ2 653 aa6.87□□□□□ -1.31
UBR4-212ENST00000475973 SNX25Q9H3E2 840 aa6.87□□□□□ -1.31
UBR4-212ENST00000475973 GSTO2Q9H4Y5 243 aa6.87□□□□□ -1.31
UBR4-212ENST00000475973 COQ10BQ9H8M1 238 aa6.87□□□□□ -1.31
UBR4-212ENST00000475973 GLOD4Q9HC38 313 aa6.87□□□□□ -1.31
UBR4-212ENST00000475973 TNFRSF12AQ9NP84 129 aa6.87□□□□□ -1.31
UBR4-212ENST00000475973 CHST12Q9NRB3 414 aa6.87□□□□□ -1.31
UBR4-212ENST00000475973 IARS2Q9NSE4 1012 aaKnown RBP6.87□□□□□ -1.31
UBR4-212ENST00000475973 C20orf96Q9NUD7 363 aaPredicted RBP6.87□□□□□ -1.31
UBR4-212ENST00000475973 TBCCD1Q9NVR7 557 aa6.87□□□□□ -1.31
UBR4-212ENST00000475973 NCKIPSDQ9NZQ3 722 aa6.87□□□□□ -1.31
UBR4-212ENST00000475973 KLHL8Q9P2G9 620 aaPredicted RBP6.87□□□□□ -1.31
UBR4-212ENST00000475973 XPR1Q9UBH6 696 aa6.87□□□□□ -1.31
UBR4-212ENST00000475973 TLK1Q9UKI8 766 aa6.87□□□□□ -1.31
UBR4-212ENST00000475973 RUVBL2Q9Y230 463 aaKnown RBP6.87□□□□□ -1.31
UBR4-212ENST00000475973 PIN4Q9Y237 131 aaKnown RBP6.87□□□□□ -1.31
UBR4-212ENST00000475973 AP4S1Q9Y587 144 aa6.87□□□□□ -1.31
UBR4-212ENST00000475973 TRIP11Q15643 1979 aa6.87□□□□□ -1.31
UBR4-212ENST00000475973 GBF1Q92538 1859 aa6.87□□□□□ -1.31
UBR4-212ENST00000475973 TRANK1O15050 2925 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 A0A0U1RQF3 1178 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.86□□□□□ -1.31
UBR4-212ENST00000475973 FAM95CA0A1B0GW59 222 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 MROH6A6NGR9 719 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 A8MT66 165 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 BBIP1A8MTZ0 92 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 H3BSA7 217 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 STX16-NPEPL1H3BU86 382 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 SLC7A4O43246 635 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 HTRA2O43464 458 aaPredicted RBP6.86□□□□□ -1.31
UBR4-212ENST00000475973 NRP2O60462 931 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 USP12O75317 370 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 TRMUO75648 421 aaKnown RBP6.86□□□□□ -1.31
UBR4-212ENST00000475973 IPO13O94829 963 aaKnown RBP6.86□□□□□ -1.31
UBR4-212ENST00000475973 PRSS23O95084 383 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 PGM3O95394 542 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 EOMESO95936 686 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 CYP11A1P05108 521 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 ETS2P15036 469 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 STMN1P16949 149 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 PSMC3P17980 439 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 PAX3P23760 479 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 ADORA2BP29275 332 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 CA8P35219 290 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 IRS1P35568 1242 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 ZFP36L2P47974 494 aaKnown RBP6.86□□□□□ -1.31
UBR4-212ENST00000475973 CD151P48509 253 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 CLCN5P51795 746 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 FAM189BP81408 668 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 TIAL1Q01085 375 aaKnown RBP eCLIP6.86□□□□□ -1.317e-6■■□□□ 11.9
UBR4-212ENST00000475973 CTBSQ01459 385 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 PRKCQQ04759 706 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 USP10Q14694 798 aaKnown RBP6.86□□□□□ -1.31
UBR4-212ENST00000475973 ACAP2Q15057 778 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 BRMS1LQ5PSV4 323 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 PLPP4Q5VZY2 271 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 REP15Q6BDI9 236 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 ESRP1Q6NXG1 681 aaKnown RBP6.86□□□□□ -1.31
UBR4-212ENST00000475973 PAOXQ6QHF9 649 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 GLB1LQ6UWU2 654 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 TRIM67Q6ZTA4 783 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 CATSPER4Q7RTX7 472 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 ADGRD2Q7Z7M1 963 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 RBM12BQ8IXT5 1001 aaKnown RBP6.86□□□□□ -1.31
UBR4-212ENST00000475973 BBS5Q8N3I7 341 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 SMRP1Q8NCR6 262 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 GPR150Q8NGU9 434 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 HEXDCQ8WVB3 486 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 NDRG1Q92597 394 aaKnown RBP6.86□□□□□ -1.31
UBR4-212ENST00000475973 LPGAT1Q92604 370 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 ITFG2Q969R8 447 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 ATP6V1E2Q96A05 226 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 TMEM169Q96HH4 297 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 MPP4Q96JB8 637 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 CATSPER2Q96P56 530 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 CASD1Q96PB1 797 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 OMDQ99983 421 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 HOPXQ9BPY8 73 aaPredicted RBP6.86□□□□□ -1.31
UBR4-212ENST00000475973 TCF25Q9BQ70 676 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 RTP3Q9BQQ7 232 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 HAUS8Q9BT25 410 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 SLC25A23Q9BV35 468 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 CEP41Q9BYV8 373 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 ULBP1Q9BZM6 244 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 MUC13Q9H3R2 512 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 NXF3Q9H4D5 531 aaKnown RBP6.86□□□□□ -1.31
UBR4-212ENST00000475973 EPHX3Q9H6B9 360 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 TASP1Q9H6P5 420 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 COPS7BQ9H9Q2 264 aaPredicted RBP6.86□□□□□ -1.31
UBR4-212ENST00000475973 POPDC3Q9HBV1 291 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 CD320Q9NPF0 282 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 PNPLA3Q9NST1 481 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 POLR3BQ9NW08 1133 aaPredicted RBP6.86□□□□□ -1.31
UBR4-212ENST00000475973 PIH1D1Q9NWS0 290 aaKnown RBP6.86□□□□□ -1.31
UBR4-212ENST00000475973 SPG21Q9NZD8 308 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 EPS15L1Q9UBC2 864 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 SLC39A10Q9ULF5 831 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 SLC8A2Q9UPR5 921 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 ST14Q9Y5Y6 855 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 TET1Q8NFU7 2136 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms