RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 ADAMTSL4Q6UY14 1074 aa22.06■■□□□ 1.12
MCF2L2-209ENST00000475664 PTAR1Q7Z6K3 402 aaPredicted RBP22.06■■□□□ 1.12
MCF2L2-209ENST00000475664 OR13H1Q8NG92 308 aa22.06■■□□□ 1.12
MCF2L2-209ENST00000475664 OR13J1Q8NGT2 312 aa22.06■■□□□ 1.12
MCF2L2-209ENST00000475664 CEP76Q8TAP6 659 aa22.06■■□□□ 1.12
MCF2L2-209ENST00000475664 FBXO25Q8TCJ0 367 aa22.06■■□□□ 1.12
MCF2L2-209ENST00000475664 ZSCAN5AQ9BUG6 496 aa22.06■■□□□ 1.12
MCF2L2-209ENST00000475664 TREX1Q9NSU2 369 aa22.06■■□□□ 1.12
MCF2L2-209ENST00000475664 ZDHHC18Q9NUE0 388 aa22.06■■□□□ 1.12
MCF2L2-209ENST00000475664 SLC2A6Q9UGQ3 507 aa22.06■■□□□ 1.12
MCF2L2-209ENST00000475664 FNDC3AQ9Y2H6 1198 aaKnown RBP22.06■■□□□ 1.12
MCF2L2-209ENST00000475664 PCDH15Q96QU1 1955 aa22.06■■□□□ 1.12
MCF2L2-209ENST00000475664 GLYATL1P3A0A0U1RQE8 302 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 E7ESA3 106 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 CCL22O00626 93 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 TOR1BO14657 336 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 BANF1O75531 89 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 RHOXF2BP0C7M4 288 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 NMBRP28336 390 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 RABIFP47224 123 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 CSNK1EP49674 416 aaKnown RBP22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 ARSDP51689 593 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 YPEL5P62699 121 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 TEAD4Q15561 434 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 CHRNA6Q15825 494 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 BBS9Q3SYG4 887 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 PDPK2PQ6A1A2 396 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 CASC4Q6P4E1 433 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 FAM151BQ6UXP7 276 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 Q6ZSR6 202 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 KLHDC7BQ96G42 594 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 CDKN2AIPNLQ96HQ2 116 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 PHOX2BQ99453 314 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 RHOXF2Q9BQY4 288 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 APOOQ9BUR5 198 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 SPATA16Q9BXB7 569 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 TEX101Q9BY14 249 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 CAPN10Q9HC96 672 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 GDF3Q9NR23 364 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 SAMD15Q9P1V8 674 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 APPL1Q9UKG1 709 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 OR1A2Q9Y585 309 aa22.05■■□□□ 1.12
MCF2L2-209ENST00000475664 FAM237BA0A1B0GVD1 139 aa22.04■■□□□ 1.12
MCF2L2-209ENST00000475664 MAGEB16A2A368 324 aa22.04■■□□□ 1.12
MCF2L2-209ENST00000475664 PATE3B3GLJ2 98 aa22.04■■□□□ 1.12
MCF2L2-209ENST00000475664 THEGLP0DJG4 465 aa22.04■■□□□ 1.12
MCF2L2-209ENST00000475664 PEX6Q13608 980 aa22.04■■□□□ 1.12
MCF2L2-209ENST00000475664 CCDC6Q16204 474 aa22.04■■□□□ 1.12
MCF2L2-209ENST00000475664 SLC23A3Q6PIS1 610 aa22.04■■□□□ 1.12
MCF2L2-209ENST00000475664 HEATR4Q86WZ0 1026 aa22.04■■□□□ 1.12
MCF2L2-209ENST00000475664 SLC22A18ASQ8N1D0 253 aa22.04■■□□□ 1.12
MCF2L2-209ENST00000475664 FUBP1Q96AE4 644 aaKnown RBP22.04■■□□□ 1.12
MCF2L2-209ENST00000475664 MFSD3Q96ES6 412 aa22.04■■□□□ 1.12
MCF2L2-209ENST00000475664 STAMBPL1Q96FJ0 436 aa22.04■■□□□ 1.12
MCF2L2-209ENST00000475664 TBATAQ96M53 351 aa22.04■■□□□ 1.12
MCF2L2-209ENST00000475664 WDR83Q9BRX9 315 aaKnown RBP22.04■■□□□ 1.12
MCF2L2-209ENST00000475664 FAM129AQ9BZQ8 928 aa22.04■■□□□ 1.12
MCF2L2-209ENST00000475664 WDR26Q9H7D7 661 aa22.04■■□□□ 1.12
MCF2L2-209ENST00000475664 CNOT6Q9ULM6 557 aaKnown RBP22.04■■□□□ 1.12
MCF2L2-209ENST00000475664 OTOGLQ3ZCN5 2332 aa22.04■■□□□ 1.12
MCF2L2-209ENST00000475664 MYO15AQ9UKN7 3530 aa22.04■■□□□ 1.12
MCF2L2-209ENST00000475664 A0A1B0GVT2 93 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 TLR4O00206 839 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 SRP72O76094 671 aaKnown RBP22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 PRAMEF1O95521 474 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 CFIP05156 583 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 HOXC4P09017 264 aaPredicted RBP22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 NXPH1P58417 271 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 KIAA1024LP59773 190 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 CDK3Q00526 305 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 BNC1Q01954 994 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 ATP13A5Q4VNC0 1218 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 TRIM61Q5EBN2 209 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 TPRG1LQ5T0D9 272 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 CES3Q6UWW8 571 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 MICALCLQ6ZW33 695 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 TMEM135Q86UB9 458 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 IGDCC3Q8IVU1 814 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 LRRC39Q96DD0 335 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 EBNA1BP2Q99848 306 aaKnown RBP22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 TRIM56Q9BRZ2 755 aaKnown RBP22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 PHACTR1Q9C0D0 580 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 SMOC1Q9H4F8 434 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 SUDS3Q9H7L9 328 aaPredicted RBP22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 PHPT1Q9NRX4 125 aaPredicted RBP22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 NCDNQ9UBB6 729 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 TMPRSS11EQ9UL52 423 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 MAD1L1Q9Y6D9 718 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 TEX264Q9Y6I9 313 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 ADAMTS9Q9P2N4 1935 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 DMDP11532 3685 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 TMEM131Q92545 1883 aa22.03■■□□□ 1.12
MCF2L2-209ENST00000475664 LRP4O75096 1905 aa22.02■■□□□ 1.12
MCF2L2-209ENST00000475664 CCDC162PA2VCL2 907 aa22.02■■□□□ 1.12
MCF2L2-209ENST00000475664 GPR39O43194 453 aa22.02■■□□□ 1.12
MCF2L2-209ENST00000475664 MAGEC1O60732 1142 aa22.02■■□□□ 1.12
MCF2L2-209ENST00000475664 MYCLP1P12525 358 aaPredicted RBP22.02■■□□□ 1.12
MCF2L2-209ENST00000475664 MC4RP32245 332 aa22.02■■□□□ 1.12
MCF2L2-209ENST00000475664 PDIA2Q13087 525 aaKnown RBP22.02■■□□□ 1.12
MCF2L2-209ENST00000475664 NFATC4Q14934 902 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms