RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 LYPLAL1Q5VWZ2 237 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 CGB2Q6NT52 195 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 BRAT1Q6PJG6 821 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 C6orf89Q6UWU4 347 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 VITQ6UXI7 678 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 CCDC121Q6ZUS5 278 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 YTHDF3Q7Z739 585 aaKnown RBP10.18□□□□□ -0.78
PCCB-213ENST00000475214 C12orf40Q86WS4 652 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 CRLF3Q8IUI8 442 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 C10orf107Q8IVU9 208 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 SUGP1Q8IWZ8 645 aaKnown RBP10.18□□□□□ -0.78
PCCB-213ENST00000475214 ETFBKMTQ8IXQ9 262 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 STK40Q8N2I9 435 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 CBARPQ8N350 705 aaPredicted RBP10.18□□□□□ -0.78
PCCB-213ENST00000475214 PLCD3Q8N3E9 789 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 FSTL5Q8N475 847 aaPredicted RBP10.18□□□□□ -0.78
PCCB-213ENST00000475214 KDM1BQ8NB78 822 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 CHST14Q8NCH0 376 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 ZNF398Q8TD17 642 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 FRS2Q8WU20 508 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 UCMAQ8WVF2 138 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 SORCS1Q8WY21 1168 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 ELSPBP1Q96BH3 223 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 NXNL1Q96CM4 212 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 KLHL32Q96NJ5 620 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 OLFM1Q99784 485 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 OSBPL1AQ9BXW6 950 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 SYTL2Q9HCH5 934 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 THAP1Q9NVV9 213 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 IL36AQ9UHA7 158 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 CDH22Q9UJ99 828 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 FNDC3AQ9Y2H6 1198 aaKnown RBP10.18□□□□□ -0.78
PCCB-213ENST00000475214 COMMD10Q9Y6G5 202 aa10.18□□□□□ -0.78
PCCB-213ENST00000475214 ATXN2Q99700 1313 aaKnown RBP10.17□□□□□ -0.78
PCCB-213ENST00000475214 TMEM221A6NGB7 291 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 GOLGA8CPA6NN73 597 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.17□□□□□ -0.78
PCCB-213ENST00000475214 G3V2L1 256 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 M0R296 226 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 TRIM13O60858 407 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 VPS26AO75436 327 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 RHOBTB1O94844 696 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 PYGLP06737 847 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 RBP1P09455 135 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 PRSS56P0CW18 603 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 CCDC166P0CW27 439 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 FGF3P11487 239 aaPredicted RBP10.17□□□□□ -0.78
PCCB-213ENST00000475214 PSMC3P17980 439 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 XPAP23025 273 aaPredicted RBP10.17□□□□□ -0.78
PCCB-213ENST00000475214 FMO4P31512 558 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 GMPRP36959 345 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 PTGER3P43115 390 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 SLC6A11P48066 632 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 SLC1A6P48664 564 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 CDKN2DP55273 166 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 ZXDAP98168 799 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 KDSRQ06136 332 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 SIGLEC14Q08ET2 396 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 ARHGEF7Q14155 803 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 CSHL1Q14406 222 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 ACAP2Q15057 778 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 CDKN3Q16667 212 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 PTPRNQ16849 979 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 ARSIQ5FYB1 569 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 ZDHHC20Q5W0Z9 365 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 PSAPL1Q6NUJ1 521 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 ZNF549Q6P9A3 640 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 CRTC1Q6UUV9 634 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 ZYG11AQ6WRX3 759 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 TRIM67Q6ZTA4 783 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 NUDT18Q6ZVK8 323 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 SNX20Q7Z614 316 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 ZSWIM9Q86XI8 627 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 CENPLQ8N0S6 344 aaPredicted RBP10.17□□□□□ -0.78
PCCB-213ENST00000475214 GRIN3AQ8TCU5 1115 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 HCAR2Q8TDS4 363 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 PPP4R1Q8TF05 950 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 LPGAT1Q92604 370 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 PBXIP1Q96AQ6 731 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 MCCC1Q96RQ3 725 aaPredicted RBP10.17□□□□□ -0.78
PCCB-213ENST00000475214 MYADMQ96S97 322 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 MRPL57Q9BQC6 102 aaKnown RBP10.17□□□□□ -0.78
PCCB-213ENST00000475214 MRPL46Q9H2W6 279 aaKnown RBP10.17□□□□□ -0.78
PCCB-213ENST00000475214 FAM96AQ9H5X1 160 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 BRD9Q9H8M2 597 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 NPHS2Q9NP85 383 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 HPS4Q9NQG7 708 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 TAS2R13Q9NYV9 303 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 CPSF2Q9P2I0 782 aaKnown RBP10.17□□□□□ -0.78
PCCB-213ENST00000475214 USH1CQ9Y6N9 552 aa10.17□□□□□ -0.78
PCCB-213ENST00000475214 MUC6Q6W4X9 2439 aa10.16□□□□□ -0.78
PCCB-213ENST00000475214 GLYATL1P3A0A0U1RQE8 302 aa10.16□□□□□ -0.78
PCCB-213ENST00000475214 A0A0U1RQS6 177 aa10.16□□□□□ -0.78
PCCB-213ENST00000475214 TSPAN11A1L157 253 aa10.16□□□□□ -0.78
PCCB-213ENST00000475214 NPIPB15A6NHN6 443 aaPredicted RBP10.16□□□□□ -0.78
PCCB-213ENST00000475214 CCT8L1PA6NM43 557 aa10.16□□□□□ -0.78
PCCB-213ENST00000475214 A8MX80 341 aa10.16□□□□□ -0.78
PCCB-213ENST00000475214 TMEM114B3SHH9 223 aa10.16□□□□□ -0.78
PCCB-213ENST00000475214 F8W8V4 182 aa10.16□□□□□ -0.78
PCCB-213ENST00000475214 SNNO75324 88 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms