RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 TPSB2P20231 275 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 CA4P22748 312 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 PSMA3P25788 255 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 MAGEA3P43357 314 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 RPL21P46778 160 aaKnown RBP6.97□□□□□ -1.29
LIMD1-204ENST00000474665 SPINT3P49223 89 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 CSNK1EP49674 416 aaKnown RBP6.97□□□□□ -1.29
LIMD1-204ENST00000474665 ZNF140P52738 457 aaPredicted RBP6.97□□□□□ -1.29
LIMD1-204ENST00000474665 TERF1P54274 439 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 EPHB1P54762 984 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 DR1Q01658 176 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 PRPSAP1Q14558 356 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 IRF4Q15306 451 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 TPSAB1Q15661 275 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 CERCAMQ5T4B2 595 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 NAPEPLDQ6IQ20 393 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 ERAP2Q6P179 960 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 C4orf22Q6V702 233 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 USP45Q70EL2 814 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 CYP2U1Q7Z449 544 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 ABI3BPQ7Z7G0 1075 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 SPATS2Q86XZ4 545 aaKnown RBP6.97□□□□□ -1.29
LIMD1-204ENST00000474665 SLC22A18ASQ8N1D0 253 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 NAT8LQ8N9F0 302 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 GPR26Q8NDV2 337 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 CXorf40AQ8TE69 158 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 SNX19Q92543 992 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 DTD2Q96FN9 168 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 IFT43Q96FT9 208 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 SERAC1Q96JX3 654 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 ZNF778Q96MU6 729 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 PWWP2AQ96N64 755 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 FCRL3Q96P31 734 aaPredicted RBP6.97□□□□□ -1.29
LIMD1-204ENST00000474665 WDR83Q9BRX9 315 aaKnown RBP6.97□□□□□ -1.29
LIMD1-204ENST00000474665 FSD1LQ9BXM9 530 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 ABCG8Q9H221 673 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 ZFYVE1Q9HBF4 777 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 HAUS2Q9NVX0 235 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 IL17CQ9P0M4 197 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 DKK4Q9UBT3 224 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 CD84Q9UIB8 345 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 TMPRSS11EQ9UL52 423 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 CNOT6Q9ULM6 557 aaKnown RBP6.97□□□□□ -1.29
LIMD1-204ENST00000474665 ARL5AQ9Y689 179 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 UNC13CQ8NB66 2214 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 A0A1B0GVT2 93 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 TRABD2BA6NFA1 517 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 MROH6A6NGR9 719 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 FADS2P1A8MWK0 482 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 B8ZZF3 427 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 PRAMEF26H0Y7S4 382 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 PSMD11O00231 422 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 CCL22O00626 93 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 BCAT2O15382 392 aaPredicted RBP6.96□□□□□ -1.3
LIMD1-204ENST00000474665 GPR39O43194 453 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 LZTS3O60299 673 aaPredicted RBP6.96□□□□□ -1.3
LIMD1-204ENST00000474665 SEC31AO94979 1220 aaKnown RBP6.96□□□□□ -1.3
LIMD1-204ENST00000474665 FUCA1P04066 466 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 ZNF30P17039 623 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 ENGP17813 658 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 HNRNPA2B1P22626 353 aaKnown RBP6.96□□□□□ -1.3
LIMD1-204ENST00000474665 HOXD12P35452 270 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 ACTN2P35609 894 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 HMGCLP35914 325 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 TRIM23P36406 574 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 CCR10P46092 362 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 ARSDP51689 593 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 PFN3P60673 137 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 RACK1P63244 317 aaKnown RBP6.96□□□□□ -1.3
LIMD1-204ENST00000474665 CRADDP78560 199 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 BASP1P80723 227 aaKnown RBP6.96□□□□□ -1.3
LIMD1-204ENST00000474665 XIAPP98170 497 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 DHX34Q14147 1143 aaKnown RBP6.96□□□□□ -1.3
LIMD1-204ENST00000474665 INPP5AQ14642 412 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 ACOX1Q15067 660 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 PPP1R7Q15435 360 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 TRIP6Q15654 476 aaKnown RBP6.96□□□□□ -1.3
LIMD1-204ENST00000474665 KIF19Q2TAC6 998 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 MSS51Q4VC12 460 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 CCDC38Q502W7 563 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 SETMARQ53H47 684 aaPredicted RBP6.96□□□□□ -1.3
LIMD1-204ENST00000474665 TRIM61Q5EBN2 209 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 WDR45BQ5MNZ6 344 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 PRAMEF14Q5SWL7 426 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 HENMT1Q5T8I9 393 aaKnown RBP6.96□□□□□ -1.3
LIMD1-204ENST00000474665 DENND2CQ68D51 928 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 DUPD1Q68J44 220 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 IGDCC3Q8IVU1 814 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 RGL4Q8IZJ4 473 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 MPP5Q8N3R9 675 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 MMGT1Q8N4V1 131 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 PAF1Q8N7H5 531 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 MCUQ8NE86 351 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 DENND6BQ8NEG7 585 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 OR13H1Q8NG92 308 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 OR13C4Q8NGS5 318 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 OR2I1PQ8NGU4 316 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 BRSK1Q8TDC3 778 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 BLOC1S5Q8TDH9 187 aa6.96□□□□□ -1.3
LIMD1-204ENST00000474665 GRK7Q8WTQ7 553 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms