RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 SLC30A1Q9Y6M5 507 aa20.29■□□□□ 0.84
CDHR3-210ENST00000474330 TMEM120BA0PK00 339 aa20.28■□□□□ 0.84
CDHR3-210ENST00000474330 GOLGA8RI6L899 631 aa20.28■□□□□ 0.84
CDHR3-210ENST00000474330 GAPDHSO14556 408 aaPredicted RBP20.28■□□□□ 0.84
CDHR3-210ENST00000474330 PRPF4O43172 522 aaKnown RBP eCLIP20.28■□□□□ 0.841e-8■□□□□ 8.9
CDHR3-210ENST00000474330 TYROBPO43914 113 aa20.28■□□□□ 0.84
CDHR3-210ENST00000474330 RNASEH1O60930 286 aaKnown RBP20.28■□□□□ 0.84
CDHR3-210ENST00000474330 SRP72O76094 671 aaKnown RBP20.28■□□□□ 0.84
CDHR3-210ENST00000474330 KLF8O95600 359 aaPredicted RBP20.28■□□□□ 0.84
CDHR3-210ENST00000474330 PYGBP11216 843 aa20.28■□□□□ 0.84
CDHR3-210ENST00000474330 ADRB3P13945 408 aa20.28■□□□□ 0.84
CDHR3-210ENST00000474330 TARSP26639 723 aaKnown RBP20.28■□□□□ 0.84
CDHR3-210ENST00000474330 CCNFP41002 786 aa20.28■□□□□ 0.84
CDHR3-210ENST00000474330 ABCG1P45844 678 aa20.28■□□□□ 0.84
CDHR3-210ENST00000474330 PSMD8P48556 350 aa20.28■□□□□ 0.84
CDHR3-210ENST00000474330 ATP1A2P50993 1020 aa20.28■□□□□ 0.84
CDHR3-210ENST00000474330 NEK3P51956 506 aa20.28■□□□□ 0.84
CDHR3-210ENST00000474330 SATB1Q01826 763 aa20.28■□□□□ 0.84
CDHR3-210ENST00000474330 CACNG1Q06432 222 aa20.28■□□□□ 0.84
CDHR3-210ENST00000474330 ELP6Q0PNE2 266 aa20.28■□□□□ 0.84
CDHR3-210ENST00000474330 ZNF789Q5FWF6 425 aa20.28■□□□□ 0.84
CDHR3-210ENST00000474330 CNSTQ6PJW8 725 aa20.28■□□□□ 0.84
CDHR3-210ENST00000474330 ERN2Q76MJ5 926 aaKnown RBP20.28■□□□□ 0.84
CDHR3-210ENST00000474330 BANPQ8N9N5 519 aa20.28■□□□□ 0.84
CDHR3-210ENST00000474330 TXNDC5Q8NBS9 432 aaKnown RBP20.28■□□□□ 0.84
CDHR3-210ENST00000474330 OR2T3Q8NH03 318 aa20.28■□□□□ 0.84
CDHR3-210ENST00000474330 KLF6Q99612 283 aaPredicted RBP20.28■□□□□ 0.84
CDHR3-210ENST00000474330 FBRSQ9HAH7 460 aa20.28■□□□□ 0.84
CDHR3-210ENST00000474330 KCNK9Q9NPC2 374 aa20.28■□□□□ 0.84
CDHR3-210ENST00000474330 INTS10Q9NVR2 710 aaKnown RBP20.28■□□□□ 0.84
CDHR3-210ENST00000474330 SMG5Q9UPR3 1016 aaKnown RBP20.28■□□□□ 0.84
CDHR3-210ENST00000474330 TPP1O14773 563 aa20.27■□□□□ 0.84
CDHR3-210ENST00000474330 AREL1O15033 823 aa20.27■□□□□ 0.84
CDHR3-210ENST00000474330 ADAM23O75077 832 aa20.27■□□□□ 0.84
CDHR3-210ENST00000474330 PRSS56P0CW18 603 aa20.27■□□□□ 0.84
CDHR3-210ENST00000474330 PMLP29590 882 aa20.27■□□□□ 0.84
CDHR3-210ENST00000474330 MAGEA12P43365 314 aa20.27■□□□□ 0.84
CDHR3-210ENST00000474330 SPINT3P49223 89 aa20.27■□□□□ 0.84
CDHR3-210ENST00000474330 STARD3Q14849 445 aa20.27■□□□□ 0.84
CDHR3-210ENST00000474330 UBXN2BQ14CS0 331 aa20.27■□□□□ 0.84
CDHR3-210ENST00000474330 CST6Q15828 149 aa20.27■□□□□ 0.84
CDHR3-210ENST00000474330 HSF5Q4G112 596 aaPredicted RBP20.27■□□□□ 0.84
CDHR3-210ENST00000474330 ZRANB3Q5FWF4 1079 aa20.27■□□□□ 0.84
CDHR3-210ENST00000474330 PSAPL1Q6NUJ1 521 aa20.27■□□□□ 0.84
CDHR3-210ENST00000474330 PNPLA1Q8N8W4 532 aa20.27■□□□□ 0.84
CDHR3-210ENST00000474330 GPR26Q8NDV2 337 aa20.27■□□□□ 0.84
CDHR3-210ENST00000474330 RAB7BQ96AH8 199 aa20.27■□□□□ 0.84
CDHR3-210ENST00000474330 PLEKHG4BQ96PX9 1271 aa20.27■□□□□ 0.84
CDHR3-210ENST00000474330 OSBPL6Q9BZF3 934 aa20.27■□□□□ 0.84
CDHR3-210ENST00000474330 PKD2L2Q9NZM6 624 aa20.27■□□□□ 0.84
CDHR3-210ENST00000474330 ADAM21Q9UKJ8 722 aa20.27■□□□□ 0.84
CDHR3-210ENST00000474330 FNDC3AQ9Y2H6 1198 aaKnown RBP20.27■□□□□ 0.84
CDHR3-210ENST00000474330 BPTFQ12830 3046 aa20.27■□□□□ 0.84
CDHR3-210ENST00000474330 WDR87Q6ZQQ6 2873 aa20.27■□□□□ 0.84
CDHR3-210ENST00000474330 GLYATL1P3A0A0U1RQE8 302 aa20.27■□□□□ 0.83
CDHR3-210ENST00000474330 H0Y858 1186 aa20.27■□□□□ 0.83
CDHR3-210ENST00000474330 PSMD11O00231 422 aa20.27■□□□□ 0.83
CDHR3-210ENST00000474330 SPINT1O43278 529 aa20.27■□□□□ 0.83
CDHR3-210ENST00000474330 SPAG7O75391 227 aa20.27■□□□□ 0.83
CDHR3-210ENST00000474330 PRAMEF1O95521 474 aa20.27■□□□□ 0.83
CDHR3-210ENST00000474330 ADH1BP00325 375 aa20.27■□□□□ 0.83
CDHR3-210ENST00000474330 HOXB2P14652 356 aa20.27■□□□□ 0.83
CDHR3-210ENST00000474330 C5AR1P21730 350 aa20.27■□□□□ 0.83
CDHR3-210ENST00000474330 TYK2P29597 1187 aa20.27■□□□□ 0.83
CDHR3-210ENST00000474330 TTPAP49638 278 aa20.27■□□□□ 0.83
CDHR3-210ENST00000474330 CDKN1CP49918 316 aaPredicted RBP20.27■□□□□ 0.83
CDHR3-210ENST00000474330 SERPINB8P50452 374 aa20.27■□□□□ 0.83
CDHR3-210ENST00000474330 COPAP53621 1224 aa20.27■□□□□ 0.83
CDHR3-210ENST00000474330 AARS2Q5JTZ9 985 aaKnown RBP20.27■□□□□ 0.83
CDHR3-210ENST00000474330 KIAA1211LQ6NV74 962 aa20.27■□□□□ 0.83
CDHR3-210ENST00000474330 FAM151BQ6UXP7 276 aa20.27■□□□□ 0.83
CDHR3-210ENST00000474330 LIPIQ6XZB0 460 aa20.27■□□□□ 0.83
CDHR3-210ENST00000474330 SNX20Q7Z614 316 aa20.27■□□□□ 0.83
CDHR3-210ENST00000474330 RAVER1Q8IY67 606 aaKnown RBP20.27■□□□□ 0.83
CDHR3-210ENST00000474330 PIANPQ8IYJ0 282 aa20.27■□□□□ 0.83
CDHR3-210ENST00000474330 ACVR1CQ8NER5 493 aa20.27■□□□□ 0.83
CDHR3-210ENST00000474330 CLDN23Q96B33 292 aa20.27■□□□□ 0.83
CDHR3-210ENST00000474330 FAM122AQ96E09 287 aa20.27■□□□□ 0.83
CDHR3-210ENST00000474330 RAD18Q9NS91 495 aa20.27■□□□□ 0.83
CDHR3-210ENST00000474330 CORO1CQ9ULV4 474 aaPredicted RBP20.27■□□□□ 0.83
CDHR3-210ENST00000474330 FAM95CA0A1B0GW59 222 aa20.26■□□□□ 0.83
CDHR3-210ENST00000474330 A0A1W2PQF6 199 aa20.26■□□□□ 0.83
CDHR3-210ENST00000474330 RGSL1A5PLK6 1076 aa20.26■□□□□ 0.83
CDHR3-210ENST00000474330 FAM47DPA6NHR8 397 aa20.26■□□□□ 0.83
CDHR3-210ENST00000474330 PFDN6O15212 129 aa20.26■□□□□ 0.83
CDHR3-210ENST00000474330 CSRP3P50461 194 aa20.26■□□□□ 0.83
CDHR3-210ENST00000474330 CBX1P83916 185 aa20.26■□□□□ 0.83
CDHR3-210ENST00000474330 MPP2Q14168 576 aa20.26■□□□□ 0.83
CDHR3-210ENST00000474330 RNF187Q5TA31 235 aaPredicted RBP20.26■□□□□ 0.83
CDHR3-210ENST00000474330 ZNF776Q68DI1 518 aaPredicted RBP20.26■□□□□ 0.83
CDHR3-210ENST00000474330 CERS6Q6ZMG9 384 aa20.26■□□□□ 0.83
CDHR3-210ENST00000474330 HSD11B1LQ7Z5J1 315 aa20.26■□□□□ 0.83
CDHR3-210ENST00000474330 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.26■□□□□ 0.83
CDHR3-210ENST00000474330 ERLEC1Q96DZ1 483 aa20.26■□□□□ 0.83
CDHR3-210ENST00000474330 APOPT1Q96IL0 206 aa20.26■□□□□ 0.83
CDHR3-210ENST00000474330 NELL2Q99435 816 aa20.26■□□□□ 0.83
CDHR3-210ENST00000474330 SNX15Q9NRS6 342 aa20.26■□□□□ 0.83
CDHR3-210ENST00000474330 MKS1Q9NXB0 559 aa20.26■□□□□ 0.83
CDHR3-210ENST00000474330 NFKBIL1Q9UBC1 381 aaPredicted RBP20.26■□□□□ 0.83
CDHR3-210ENST00000474330 VPS9D1Q9Y2B5 631 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms