RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 LY6KQ17RY6 165 aa18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 CTU2Q2VPK5 515 aaKnown RBP18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 PCID2Q5JVF3 399 aa18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 STK32CQ86UX6 486 aa18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 OR6Q1Q8NGQ2 317 aa18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 FAM167AQ96KS9 214 aa18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 TMEM74Q96NL1 305 aa18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 TRMOQ9BU70 441 aa18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 ALOXE3Q9BYJ1 711 aa18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 QTRT2Q9H974 415 aaKnown RBP18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 A0A0G2JMZ2 1700 aa18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 LRRC37A2A6NM11 1700 aa18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 UTRNP46939 3433 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 H3BMM5 538 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 M0R3G1 203 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 PPEF2O14830 753 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 MAN1A2O60476 641 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 MATN4O95460 622 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 APBA3O96018 575 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 IMPDH1P20839 514 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 AGXTP21549 392 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 BCAT1P54687 386 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 NFYCQ13952 458 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 CRY1Q16526 586 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 AMHR2Q16671 573 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 LRIT3Q3SXY7 679 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 OTOP3Q7RTS5 596 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 PHYKPLQ8IUZ5 450 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 SLC22A9Q8IVM8 553 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 C2CD4AQ8NCU7 369 aaPredicted RBP18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 OR6B3Q8NGW1 331 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 VPS33AQ96AX1 596 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 SDR39U1Q9NRG7 319 aaPredicted RBP18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 MYLKQ15746 1914 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 LTA4HP09960 611 aaKnown RBP18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 CDH13P55290 713 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 LSM3P62310 102 aaKnown RBP18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 HIST2H2ACQ16777 129 aaPredicted RBP18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 AASDHQ4L235 1098 aaPredicted RBP18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 PRAMEF18Q5VWM3 479 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 TMEM236Q5W0B7 351 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 ARHGAP17Q68EM7 881 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 BLOC1S3Q6QNY0 202 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 PDZD4Q76G19 769 aaPredicted RBP18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 RIMKLAQ8IXN7 391 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 SEPT1Q8WYJ6 367 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 HTRA1Q92743 480 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 ZNF486Q96H40 463 aaPredicted RBP18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 TEKT5Q96M29 485 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 TP63Q9H3D4 680 aaPredicted RBP18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 PIF1Q9H611 641 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 NOL6Q9H6R4 1146 aaKnown RBP18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 CPNE5Q9HCH3 593 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 SNX5Q9Y5X3 404 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 CITO14578 2027 aa18.55■□□□□ 0.56
ECHDC1-214ENST00000474289 M0QYT0 321 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 RGS13O14921 159 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 PIP5K1BO14986 540 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 SLC22A1O15245 554 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 CHEK2O96017 543 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 JCHAINP01591 159 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 PTPRAP18433 802 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 CD40LGP29965 261 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 PIGAP37287 484 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 RPL34P49207 117 aaKnown RBP18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 TPD52P55327 224 aaPredicted RBP18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 SH3BP2P78314 561 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 CDC20Q12834 499 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 DGUOKQ16854 277 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 COQ5Q5HYK3 327 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 ZNF678Q5SXM1 525 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 LAIR2Q6ISS4 152 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 EXOC8Q8IYI6 725 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 KIAA2013Q8IYS2 634 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 CLYBLQ8N0X4 340 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 SPATA22Q8NHS9 363 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 PPP1R16BQ96T49 567 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 PIGVQ9NUD9 493 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 FAM118AQ9NWS6 357 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 PAK1IP1Q9NWT1 392 aaPredicted RBP18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 FBXO5Q9UKT4 447 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 FNDC1Q4ZHG4 1894 aaPredicted RBP18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 ASPDHA6ND91 283 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 UBXN8O00124 270 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 PPP6CO00743 305 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 NCAM2O15394 837 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 DNAJB5O75953 348 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 RBP1P09455 135 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 CES1P23141 567 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 ARPC4P59998 168 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 TNFAIP2Q03169 654 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 ZNF789Q5FWF6 425 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 CATSPEREQ5SY80 951 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 ARMCX6Q7L4S7 300 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 RBM23Q86U06 439 aaKnown RBP18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 NIM1KQ8IY84 436 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 OR13J1Q8NGT2 312 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 LILRB4Q8NHJ6 448 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 ANKRD49Q8WVL7 239 aa18.54■□□□□ 0.56
ECHDC1-214ENST00000474289 GLMNQ92990 594 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms