RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 ZNF641Q96N77 438 aaPredicted RBP20.17■□□□□ 0.82
APP-215ENST00000474136 CATSPER2Q96P56 530 aa20.17■□□□□ 0.82
APP-215ENST00000474136 CNPY3Q9BT09 278 aa20.17■□□□□ 0.82
APP-215ENST00000474136 DDA1Q9BW61 102 aa20.17■□□□□ 0.82
APP-215ENST00000474136 WDR26Q9H7D7 661 aa20.17■□□□□ 0.82
APP-215ENST00000474136 TAAR2Q9P1P5 351 aa20.17■□□□□ 0.82
APP-215ENST00000474136 UBA2Q9UBT2 640 aaPredicted RBP20.17■□□□□ 0.82
APP-215ENST00000474136 JRKLQ9Y4A0 524 aa20.17■□□□□ 0.82
APP-215ENST00000474136 A8MX80 341 aa20.16■□□□□ 0.82
APP-215ENST00000474136 PALMO75781 387 aa20.16■□□□□ 0.82
APP-215ENST00000474136 RNF8O76064 485 aa20.16■□□□□ 0.82
APP-215ENST00000474136 GPD1P21695 349 aa20.16■□□□□ 0.82
APP-215ENST00000474136 CSTF2P33240 577 aaKnown RBP eCLIP20.16■□□□□ 0.82
APP-215ENST00000474136 ZNF143P52747 638 aaPredicted RBP20.16■□□□□ 0.82
APP-215ENST00000474136 RPL7AP62424 266 aaKnown RBP20.16■□□□□ 0.82
APP-215ENST00000474136 MESDQ14696 234 aa20.16■□□□□ 0.82
APP-215ENST00000474136 CLPPQ16740 277 aaPredicted RBP20.16■□□□□ 0.82
APP-215ENST00000474136 ANKS6Q68DC2 871 aa20.16■□□□□ 0.82
APP-215ENST00000474136 PNCKQ6P2M8 343 aa20.16■□□□□ 0.82
APP-215ENST00000474136 SLFN11Q7Z7L1 901 aa20.16■□□□□ 0.82
APP-215ENST00000474136 UNC5BQ8IZJ1 945 aa20.16■□□□□ 0.82
APP-215ENST00000474136 OR4D9Q8NGE8 314 aa20.16■□□□□ 0.82
APP-215ENST00000474136 FAM172AQ8WUF8 416 aa20.16■□□□□ 0.82
APP-215ENST00000474136 PTCD2Q8WV60 388 aaKnown RBP20.16■□□□□ 0.82
APP-215ENST00000474136 CENPIQ92674 756 aaPredicted RBP20.16■□□□□ 0.82
APP-215ENST00000474136 ABHD17AQ96GS6 310 aa20.16■□□□□ 0.82
APP-215ENST00000474136 ST14Q9Y5Y6 855 aa20.16■□□□□ 0.82
APP-215ENST00000474136 MYO9AB2RTY4 2548 aa20.16■□□□□ 0.82
APP-215ENST00000474136 CFAP69A5D8W1 941 aa20.15■□□□□ 0.82
APP-215ENST00000474136 EFCAB7A8K855 629 aa20.15■□□□□ 0.82
APP-215ENST00000474136 J3KR12 359 aa20.15■□□□□ 0.82
APP-215ENST00000474136 PPM1DO15297 605 aa20.15■□□□□ 0.82
APP-215ENST00000474136 MTSS1O43312 755 aa20.15■□□□□ 0.82
APP-215ENST00000474136 PROSCO94903 275 aa20.15■□□□□ 0.82
APP-215ENST00000474136 ELFN1P0C7U0 828 aa20.15■□□□□ 0.82
APP-215ENST00000474136 THRAP10827 490 aa20.15■□□□□ 0.82
APP-215ENST00000474136 PTPN9P43378 593 aa20.15■□□□□ 0.82
APP-215ENST00000474136 YBEYP58557 167 aaPredicted RBP20.15■□□□□ 0.82
APP-215ENST00000474136 TRA2AQ13595 282 aaKnown RBP eCLIP20.15■□□□□ 0.823e-10■■■■□ 21.8
APP-215ENST00000474136 GRM3Q14832 879 aa20.15■□□□□ 0.82
APP-215ENST00000474136 SLC30A9Q6PML9 568 aa20.15■□□□□ 0.82
APP-215ENST00000474136 FAM129CQ86XR2 697 aa20.15■□□□□ 0.82
APP-215ENST00000474136 LRRC57Q8N9N7 239 aa20.15■□□□□ 0.82
APP-215ENST00000474136 MIB2Q96AX9 1013 aa20.15■□□□□ 0.82
APP-215ENST00000474136 C16orf45Q96MC5 204 aaPredicted RBP20.15■□□□□ 0.82
APP-215ENST00000474136 GSDMCQ9BYG8 508 aa20.15■□□□□ 0.82
APP-215ENST00000474136 GPN2Q9H9Y4 310 aaPredicted RBP20.15■□□□□ 0.82
APP-215ENST00000474136 PDFQ9HBH1 243 aa20.15■□□□□ 0.82
APP-215ENST00000474136 PILRAQ9UKJ1 303 aa20.15■□□□□ 0.82
APP-215ENST00000474136 AMFRQ9UKV5 643 aa20.15■□□□□ 0.82
APP-215ENST00000474136 CAPN6Q9Y6Q1 641 aa20.15■□□□□ 0.82
APP-215ENST00000474136 SPTBN1Q01082 2364 aaKnown RBP20.14■□□□□ 0.81
APP-215ENST00000474136 IGHV1OR21-1A0A087WYE8 117 aa20.14■□□□□ 0.81
APP-215ENST00000474136 LOC101059948A0A1B0GTJ6 334 aa20.14■□□□□ 0.81
APP-215ENST00000474136 GRID2IPA4D2P6 1211 aa20.14■□□□□ 0.81
APP-215ENST00000474136 CREB3O43889 395 aa20.14■□□□□ 0.81
APP-215ENST00000474136 PSMA2P25787 234 aa20.14■□□□□ 0.81
APP-215ENST00000474136 OAS2P29728 719 aaKnown RBP20.14■□□□□ 0.81
APP-215ENST00000474136 CDC20Q12834 499 aa20.14■□□□□ 0.81
APP-215ENST00000474136 ILF3Q12906 894 aaKnown RBP eCLIP20.14■□□□□ 0.81
APP-215ENST00000474136 BIRC2Q13490 618 aa20.14■□□□□ 0.81
APP-215ENST00000474136 DEFB109BQ30KR1 87 aa20.14■□□□□ 0.81
APP-215ENST00000474136 PARP15Q460N3 678 aa20.14■□□□□ 0.81
APP-215ENST00000474136 ATP1A1-AS1Q5TC04 95 aa20.14■□□□□ 0.81
APP-215ENST00000474136 AFMIDQ63HM1 303 aa20.14■□□□□ 0.81
APP-215ENST00000474136 PEX26Q7Z412 305 aa20.14■□□□□ 0.81
APP-215ENST00000474136 NRSN1Q8IZ57 195 aa20.14■□□□□ 0.81
APP-215ENST00000474136 NAGSQ8N159 534 aa20.14■□□□□ 0.81
APP-215ENST00000474136 NTAN1Q96AB6 310 aa20.14■□□□□ 0.81
APP-215ENST00000474136 TUBGCP5Q96RT8 1024 aa20.14■□□□□ 0.81
APP-215ENST00000474136 LRRC4CQ9HCJ2 640 aa20.14■□□□□ 0.81
APP-215ENST00000474136 ALG6Q9Y672 507 aa20.14■□□□□ 0.81
APP-215ENST00000474136 ICE1Q9Y2F5 2266 aa20.13■□□□□ 0.81
APP-215ENST00000474136 MIF4GDA9UHW6 222 aaKnown RBP20.13■□□□□ 0.81
APP-215ENST00000474136 CEACAM5P06731 702 aa20.13■□□□□ 0.81
APP-215ENST00000474136 GPR3P46089 330 aa20.13■□□□□ 0.81
APP-215ENST00000474136 GNPDA1P46926 289 aa20.13■□□□□ 0.81
APP-215ENST00000474136 ACOX1Q15067 660 aa20.13■□□□□ 0.81
APP-215ENST00000474136 LACTB2Q53H82 288 aaPredicted RBP20.13■□□□□ 0.81
APP-215ENST00000474136 DCAF12Q5T6F0 453 aa20.13■□□□□ 0.81
APP-215ENST00000474136 DPPA4Q7L190 304 aa20.13■□□□□ 0.81
APP-215ENST00000474136 SRLQ86TD4 932 aa20.13■□□□□ 0.81
APP-215ENST00000474136 UMODL1-AS1Q8N2C9 162 aa20.13■□□□□ 0.81
APP-215ENST00000474136 TSEN2Q8NCE0 465 aaKnown RBP20.13■□□□□ 0.81
APP-215ENST00000474136 CTRCQ99895 268 aa20.13■□□□□ 0.81
APP-215ENST00000474136 ASPSCR1Q9BZE9 553 aa20.13■□□□□ 0.81
APP-215ENST00000474136 SPRY4Q9C004 299 aa20.13■□□□□ 0.81
APP-215ENST00000474136 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.13■□□□□ 0.81
APP-215ENST00000474136 CTAGE9A4FU28 777 aa20.12■□□□□ 0.81
APP-215ENST00000474136 PRR19A6NJB7 356 aa20.12■□□□□ 0.81
APP-215ENST00000474136 WASH4PA8MWX3 477 aa20.12■□□□□ 0.81
APP-215ENST00000474136 B4E171 279 aa20.12■□□□□ 0.81
APP-215ENST00000474136 CAPN5O15484 640 aaPredicted RBP20.12■□□□□ 0.81
APP-215ENST00000474136 ZW10O43264 779 aa20.12■□□□□ 0.81
APP-215ENST00000474136 SPOPO43791 374 aa20.12■□□□□ 0.81
APP-215ENST00000474136 MYCLP1P12525 358 aaPredicted RBP20.12■□□□□ 0.81
APP-215ENST00000474136 TNNT1P13805 278 aa20.12■□□□□ 0.81
APP-215ENST00000474136 NR1D1P20393 614 aa20.12■□□□□ 0.81
APP-215ENST00000474136 SERPINA4P29622 427 aa20.12■□□□□ 0.81
APP-215ENST00000474136 CASQ1P31415 396 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms