RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 FADS2P1A8MWK0 482 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 F5H423 210 aaPredicted RBP17.83■□□□□ 0.44
UPF3A-203ENST00000474056 APOC4-APOC2K7ER74 178 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 NTN3O00634 580 aaPredicted RBP17.83■□□□□ 0.44
UPF3A-203ENST00000474056 PMPCBO75439 489 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 TCEA3O75764 348 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 APOC2P02655 101 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 MPOP05164 745 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 CTNNA2P26232 953 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 ADCY8P40145 1251 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 PDX1P52945 283 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 CTBSQ01459 385 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 ILF3Q12906 894 aaKnown RBP eCLIP17.83■□□□□ 0.44
UPF3A-203ENST00000474056 HLTFQ14527 1009 aaKnown RBP eCLIP17.83■□□□□ 0.44
UPF3A-203ENST00000474056 RBM44Q6ZP01 1051 aaKnown RBP17.83■□□□□ 0.44
UPF3A-203ENST00000474056 MARK2Q7KZI7 788 aaKnown RBP17.83■□□□□ 0.44
UPF3A-203ENST00000474056 KIAA1328Q86T90 577 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 ZNF567Q8N184 647 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 LRRC57Q8N9N7 239 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 KIAA1524Q8TCG1 905 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 HTR3CQ8WXA8 447 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 DESI2Q9BSY9 194 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 GSDMCQ9BYG8 508 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 C10orf88Q9H8K7 445 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 ZFYVE1Q9HBF4 777 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 SPATS2LQ9NUQ6 558 aaKnown RBP17.83■□□□□ 0.44
UPF3A-203ENST00000474056 KLHL8Q9P2G9 620 aaPredicted RBP17.83■□□□□ 0.44
UPF3A-203ENST00000474056 IMPACTQ9P2X3 320 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 TRIM10Q9UDY6 481 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 RALYQ9UKM9 306 aaKnown RBP17.83■□□□□ 0.44
UPF3A-203ENST00000474056 CNOT6Q9ULM6 557 aaKnown RBP17.83■□□□□ 0.44
UPF3A-203ENST00000474056 ZNF711Q9Y462 761 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 PLEKHM1Q9Y4G2 1056 aa17.83■□□□□ 0.44
UPF3A-203ENST00000474056 OAS3Q9Y6K5 1087 aaKnown RBP17.83■□□□□ 0.44
UPF3A-203ENST00000474056 HACD1B0YJ81 288 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 NDST3O95803 873 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 SLC4A1P02730 911 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 COPS2P61201 443 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 GABREP78334 506 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 CCL7P80098 99 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 SPIDRQ14159 915 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 NOMO1Q15155 1222 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 C14orf28Q4W4Y0 310 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 CERCAMQ5T4B2 595 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 AADACL2Q6P093 401 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 SLC30A9Q6PML9 568 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 C19orf48Q6RUI8 117 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 KDELC1Q6UW63 502 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 OR6C4Q8NGE1 309 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 WDR48Q8TAF3 677 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 ZDHHC1Q8WTX9 485 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 ALG3Q92685 438 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 ATXN7L3BQ96GX2 97 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 OR2M4Q96R27 311 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 OSBPL8Q9BZF1 889 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 FAM83DQ9H4H8 585 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 MAGEE1Q9HCI5 957 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 TAAR2Q9P1P5 351 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 FAM153AQ9UHL3 310 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 PCYT1BQ9Y5K3 369 aaPredicted RBP17.82■□□□□ 0.44
UPF3A-203ENST00000474056 RNF215Q9Y6U7 377 aa17.82■□□□□ 0.44
UPF3A-203ENST00000474056 DSPP15924 2871 aaKnown RBP17.81■□□□□ 0.44
UPF3A-203ENST00000474056 A0A1W2PNU3 283 aaPredicted RBP17.81■□□□□ 0.44
UPF3A-203ENST00000474056 A0A1W2PQM1 296 aa17.81■□□□□ 0.44
UPF3A-203ENST00000474056 CCDC66A2RUB6 948 aa17.81■□□□□ 0.44
UPF3A-203ENST00000474056 MTSS1O43312 755 aa17.81■□□□□ 0.44
UPF3A-203ENST00000474056 ASMTLO95671 621 aa17.81■□□□□ 0.44
UPF3A-203ENST00000474056 ATP1A1P05023 1023 aaKnown RBP17.81■□□□□ 0.44
UPF3A-203ENST00000474056 FGF1P05230 155 aa17.81■□□□□ 0.44
UPF3A-203ENST00000474056 RPLP0P05388 317 aaKnown RBP17.81■□□□□ 0.44
UPF3A-203ENST00000474056 GLB1P16278 677 aa17.81■□□□□ 0.44
UPF3A-203ENST00000474056 RBL1P28749 1068 aa17.81■□□□□ 0.44
UPF3A-203ENST00000474056 PTPN7P35236 360 aa17.81■□□□□ 0.44
UPF3A-203ENST00000474056 MAZP56270 477 aaKnown RBP17.81■□□□□ 0.44
UPF3A-203ENST00000474056 RWDD2BP57060 319 aa17.81■□□□□ 0.44
UPF3A-203ENST00000474056 OTUD4Q01804 1114 aaKnown RBP17.81■□□□□ 0.44
UPF3A-203ENST00000474056 PYCR3Q53H96 274 aa17.81■□□□□ 0.44
UPF3A-203ENST00000474056 C3orf38Q5JPI3 329 aa17.81■□□□□ 0.44
UPF3A-203ENST00000474056 ALS2CLQ60I27 953 aa17.81■□□□□ 0.44
UPF3A-203ENST00000474056 PID1Q7Z2X4 250 aa17.81■□□□□ 0.44
UPF3A-203ENST00000474056 TMC3Q7Z5M5 1100 aa17.81■□□□□ 0.44
UPF3A-203ENST00000474056 GPR26Q8NDV2 337 aa17.81■□□□□ 0.44
UPF3A-203ENST00000474056 ACTL9Q8TC94 416 aa17.81■□□□□ 0.44
UPF3A-203ENST00000474056 HNRNPLLQ8WVV9 542 aaKnown RBP17.81■□□□□ 0.44
UPF3A-203ENST00000474056 OXNAD1Q96HP4 312 aaPredicted RBP17.81■□□□□ 0.44
UPF3A-203ENST00000474056 DCBLD2Q96PD2 775 aa17.81■□□□□ 0.44
UPF3A-203ENST00000474056 VAT1Q99536 393 aa17.81■□□□□ 0.44
UPF3A-203ENST00000474056 CDH19Q9H159 772 aa17.81■□□□□ 0.44
UPF3A-203ENST00000474056 SPO11Q9Y5K1 396 aa17.81■□□□□ 0.44
UPF3A-203ENST00000474056 ZNF106Q9H2Y7 1883 aaKnown RBP17.81■□□□□ 0.44
UPF3A-203ENST00000474056 CHD6Q8TD26 2715 aa17.8■□□□□ 0.44
UPF3A-203ENST00000474056 MACROD2A1Z1Q3 448 aa17.8■□□□□ 0.44
UPF3A-203ENST00000474056 RGSL1A5PLK6 1076 aa17.8■□□□□ 0.44
UPF3A-203ENST00000474056 H7C0C1 242 aa17.8■□□□□ 0.44
UPF3A-203ENST00000474056 AURKAO14965 403 aa17.8■□□□□ 0.44
UPF3A-203ENST00000474056 DNAJC6O75061 913 aa17.8■□□□□ 0.44
UPF3A-203ENST00000474056 ACTR1BP42025 376 aa17.8■□□□□ 0.44
UPF3A-203ENST00000474056 ATP5OP48047 213 aa17.8■□□□□ 0.44
UPF3A-203ENST00000474056 WNT3AP56704 352 aa17.8■□□□□ 0.44
UPF3A-203ENST00000474056 ACTR1AP61163 376 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms