RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 TCP10LQ8TDR4 215 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 SCAMP4Q969E2 229 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 APOPT1Q96IL0 206 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 OLFM1Q99784 485 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 GABRG3Q99928 467 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 OMDQ99983 421 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 ZNF358Q9NW07 568 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 DUSP12Q9UNI6 340 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 NEMP1O14524 444 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 COPEO14579 308 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 PRPF4O43172 522 aaKnown RBP eCLIP12.54□□□□□ -0.4
PCCB-211ENST00000473073 NDUFS3O75489 264 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 GM2AP17900 193 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 FMO4P31512 558 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 CCNFP41002 786 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 LIG3P49916 1009 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 NEK3P51956 506 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 CDKN2DP55273 166 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 TAS2R39P59534 338 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 CACNG1Q06432 222 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 NFATC2Q13469 925 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 STARD3Q14849 445 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 MLF2Q15773 248 aaPredicted RBP12.54□□□□□ -0.4
PCCB-211ENST00000473073 SDE2Q6IQ49 451 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 LIPIQ6XZB0 460 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 RAPH1Q70E73 1250 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 PIM3Q86V86 326 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 ADHFE1Q8IWW8 467 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 FLCNQ8NFG4 579 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 HCAR2Q8TDS4 363 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 PAIP2Q9BPZ3 127 aaKnown RBP12.54□□□□□ -0.4
PCCB-211ENST00000473073 BOCQ9BWV1 1114 aa12.54□□□□□ -0.4
PCCB-211ENST00000473073 UNKQ9C0B0 810 aaKnown RBP12.54□□□□□ -0.4
PCCB-211ENST00000473073 USP34Q70CQ2 3546 aa12.53□□□□□ -0.4
PCCB-211ENST00000473073 LRRK1Q38SD2 2015 aa12.53□□□□□ -0.4
PCCB-211ENST00000473073 AREL1O15033 823 aa12.53□□□□□ -0.4
PCCB-211ENST00000473073 NPC1O15118 1278 aa12.53□□□□□ -0.4
PCCB-211ENST00000473073 RNASEH1O60930 286 aaKnown RBP12.53□□□□□ -0.4
PCCB-211ENST00000473073 ZNF30P17039 623 aa12.53□□□□□ -0.4
PCCB-211ENST00000473073 RPS14P62263 151 aaKnown RBP12.53□□□□□ -0.4
PCCB-211ENST00000473073 ACOX1Q15067 660 aa12.53□□□□□ -0.4
PCCB-211ENST00000473073 PUS10Q3MIT2 529 aaKnown RBP12.53□□□□□ -0.4
PCCB-211ENST00000473073 ATP13A5Q4VNC0 1218 aa12.53□□□□□ -0.4
PCCB-211ENST00000473073 PIP5KL1Q5T9C9 394 aa12.53□□□□□ -0.4
PCCB-211ENST00000473073 HECTD2Q5U5R9 776 aa12.53□□□□□ -0.4
PCCB-211ENST00000473073 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.53□□□□□ -0.4
PCCB-211ENST00000473073 TAX1BP1Q86VP1 789 aa12.53□□□□□ -0.4
PCCB-211ENST00000473073 SERPINA9Q86WD7 417 aa12.53□□□□□ -0.4
PCCB-211ENST00000473073 LMNTD2Q8IXW0 634 aa12.53□□□□□ -0.4
PCCB-211ENST00000473073 SPATA6LQ8N4H0 392 aa12.53□□□□□ -0.4
PCCB-211ENST00000473073 LPGAT1Q92604 370 aa12.53□□□□□ -0.4
PCCB-211ENST00000473073 FAM111AQ96PZ2 611 aa12.53□□□□□ -0.4
PCCB-211ENST00000473073 SPATA16Q9BXB7 569 aa12.53□□□□□ -0.4
PCCB-211ENST00000473073 CNOT10Q9H9A5 744 aaKnown RBP12.53□□□□□ -0.4
PCCB-211ENST00000473073 CD93Q9NPY3 652 aa12.53□□□□□ -0.4
PCCB-211ENST00000473073 INTS9Q9NV88 658 aaKnown RBP12.53□□□□□ -0.4
PCCB-211ENST00000473073 PKD2L2Q9NZM6 624 aa12.53□□□□□ -0.4
PCCB-211ENST00000473073 APPL1Q9UKG1 709 aa12.53□□□□□ -0.4
PCCB-211ENST00000473073 GRID1Q9ULK0 1009 aa12.53□□□□□ -0.4
PCCB-211ENST00000473073 A0A096LPK6 155 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 MMP20O60882 483 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 C2P06681 752 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 SLC35E2BP0CK96 405 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 ITGALP20701 1170 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 MDH1P40925 334 aaKnown RBP12.52□□□□□ -0.4
PCCB-211ENST00000473073 MAGEA12P43365 314 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 CLCN5P51795 746 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 WDR4P57081 412 aaKnown RBP12.52□□□□□ -0.4
PCCB-211ENST00000473073 GNGT1P63211 74 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 IRX4P78413 519 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 DBN1Q16643 649 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 AGBL4Q5VU57 503 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 FAM46CQ5VWP2 391 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 ZNF776Q68DI1 518 aaPredicted RBP12.52□□□□□ -0.4
PCCB-211ENST00000473073 C16orf46Q6P387 395 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 TMEM92Q6UXU6 159 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 SNX20Q7Z614 316 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 TMPRSS6Q8IU80 811 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 PLD6Q8N2A8 252 aaKnown RBP12.52□□□□□ -0.4
PCCB-211ENST00000473073 PELI3Q8N2H9 469 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 HDDC3Q8N4P3 179 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 OR2T3Q8NH03 318 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 ZNF398Q8TD17 642 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 ATXN2LQ8WWM7 1075 aaKnown RBP12.52□□□□□ -0.4
PCCB-211ENST00000473073 ISL2Q96A47 359 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 SGSM3Q96HU1 749 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 CAPS2Q9BXY5 557 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 INTS10Q9NVR2 710 aaKnown RBP12.52□□□□□ -0.4
PCCB-211ENST00000473073 NKIRAS1Q9NYS0 192 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 CRLS1Q9UJA2 301 aa12.52□□□□□ -0.4
PCCB-211ENST00000473073 SMG5Q9UPR3 1016 aaKnown RBP12.52□□□□□ -0.4
PCCB-211ENST00000473073 PLXNA2O75051 1894 aa12.52□□□□□ -0.41
PCCB-211ENST00000473073 PLXNB3Q9ULL4 1909 aa12.52□□□□□ -0.41
PCCB-211ENST00000473073 KRBA1A5PL33 1030 aa12.52□□□□□ -0.41
PCCB-211ENST00000473073 IQCF5A8MTL0 148 aa12.52□□□□□ -0.41
PCCB-211ENST00000473073 RNASEH2AO75792 299 aaKnown RBP12.52□□□□□ -0.41
PCCB-211ENST00000473073 C6P13671 934 aa12.52□□□□□ -0.41
PCCB-211ENST00000473073 GLULP15104 373 aa12.52□□□□□ -0.41
PCCB-211ENST00000473073 STMN1P16949 149 aa12.52□□□□□ -0.41
PCCB-211ENST00000473073 NFKBIAP25963 317 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms