RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 PATE1Q8WXA2 126 aa22.43■■□□□ 1.18
C9orf3-213ENST00000471978 HDAC11Q96DB2 347 aa22.43■■□□□ 1.18
C9orf3-213ENST00000471978 ZNF830Q96NB3 372 aaPredicted RBP22.43■■□□□ 1.18
C9orf3-213ENST00000471978 RNF157Q96PX1 679 aa22.43■■□□□ 1.18
C9orf3-213ENST00000471978 AGAP2Q99490 1192 aa22.43■■□□□ 1.18
C9orf3-213ENST00000471978 CMKLR1Q99788 373 aa22.43■■□□□ 1.18
C9orf3-213ENST00000471978 RIOK2Q9BVS4 552 aaKnown RBP22.43■■□□□ 1.18
C9orf3-213ENST00000471978 SEMA6CQ9H3T2 930 aa22.43■■□□□ 1.18
C9orf3-213ENST00000471978 RDH14Q9HBH5 336 aa22.43■■□□□ 1.18
C9orf3-213ENST00000471978 RPL26L1Q9UNX3 145 aaKnown RBP22.43■■□□□ 1.18
C9orf3-213ENST00000471978 SSU72P8A0A1W2PR75 194 aa22.42■■□□□ 1.18
C9orf3-213ENST00000471978 JCHAINP01591 159 aa22.42■■□□□ 1.18
C9orf3-213ENST00000471978 ITIH1P19827 911 aa22.42■■□□□ 1.18
C9orf3-213ENST00000471978 ACTR1BP42025 376 aa22.42■■□□□ 1.18
C9orf3-213ENST00000471978 ACTR1AP61163 376 aa22.42■■□□□ 1.18
C9orf3-213ENST00000471978 NR1D2Q14995 579 aa22.42■■□□□ 1.18
C9orf3-213ENST00000471978 MARK2Q7KZI7 788 aaKnown RBP22.42■■□□□ 1.18
C9orf3-213ENST00000471978 NAGSQ8N159 534 aa22.42■■□□□ 1.18
C9orf3-213ENST00000471978 EXD1Q8NHP7 514 aa22.42■■□□□ 1.18
C9orf3-213ENST00000471978 OR2M4Q96R27 311 aa22.42■■□□□ 1.18
C9orf3-213ENST00000471978 CCNL2Q96S94 520 aaPredicted RBP22.42■■□□□ 1.18
C9orf3-213ENST00000471978 ACSL6Q9UKU0 697 aa22.42■■□□□ 1.18
C9orf3-213ENST00000471978 LRRD1A4D1F6 860 aa22.41■■□□□ 1.18
C9orf3-213ENST00000471978 KCNK1O00180 336 aa22.41■■□□□ 1.18
C9orf3-213ENST00000471978 INPP4BO15327 924 aa22.41■■□□□ 1.18
C9orf3-213ENST00000471978 NVLO15381 856 aaKnown RBP22.41■■□□□ 1.18
C9orf3-213ENST00000471978 CFHR1Q03591 330 aa22.41■■□□□ 1.18
C9orf3-213ENST00000471978 PYCR3Q53H96 274 aa22.41■■□□□ 1.18
C9orf3-213ENST00000471978 USP53Q70EK8 1073 aa22.41■■□□□ 1.18
C9orf3-213ENST00000471978 GALNT13Q8IUC8 556 aa22.41■■□□□ 1.18
C9orf3-213ENST00000471978 RAVER1Q8IY67 606 aaKnown RBP22.41■■□□□ 1.18
C9orf3-213ENST00000471978 SLC35G2Q8TBE7 412 aa22.41■■□□□ 1.18
C9orf3-213ENST00000471978 WBP1Q96G27 269 aa22.41■■□□□ 1.18
C9orf3-213ENST00000471978 COX14Q96I36 57 aa22.41■■□□□ 1.18
C9orf3-213ENST00000471978 LYSMD1Q96S90 227 aa22.41■■□□□ 1.18
C9orf3-213ENST00000471978 C1orf232A0A0U1RR37 186 aa22.4■■□□□ 1.18
C9orf3-213ENST00000471978 ASMTLO95671 621 aa22.4■■□□□ 1.18
C9orf3-213ENST00000471978 MMP2P08253 660 aa22.4■■□□□ 1.18
C9orf3-213ENST00000471978 ETV5P41161 510 aa22.4■■□□□ 1.18
C9orf3-213ENST00000471978 CD86P42081 329 aa22.4■■□□□ 1.18
C9orf3-213ENST00000471978 GPR3P46089 330 aa22.4■■□□□ 1.18
C9orf3-213ENST00000471978 MAPK10P53779 464 aa22.4■■□□□ 1.18
C9orf3-213ENST00000471978 PPIDQ08752 370 aaKnown RBP22.4■■□□□ 1.18
C9orf3-213ENST00000471978 CLPPQ16740 277 aaPredicted RBP22.4■■□□□ 1.18
C9orf3-213ENST00000471978 ZNF843Q8N446 348 aa22.4■■□□□ 1.18
C9orf3-213ENST00000471978 PLD5Q8N7P1 536 aa22.4■■□□□ 1.18
C9orf3-213ENST00000471978 NUDT22Q9BRQ3 303 aa22.4■■□□□ 1.18
C9orf3-213ENST00000471978 AKAP7Q9P0M2 348 aaPredicted RBP22.4■■□□□ 1.18
C9orf3-213ENST00000471978 HEY1Q9Y5J3 304 aa22.4■■□□□ 1.18
C9orf3-213ENST00000471978 PIEZO2Q9H5I5 2752 aa22.4■■□□□ 1.18
C9orf3-213ENST00000471978 SCN8AQ9UQD0 1980 aa22.39■■□□□ 1.18
C9orf3-213ENST00000471978 ZNF462Q96JM2 2506 aa22.39■■□□□ 1.18
C9orf3-213ENST00000471978 PRAMEF33A0A0G2JMD5 474 aa22.39■■□□□ 1.17
C9orf3-213ENST00000471978 PPM1DO15297 605 aa22.39■■□□□ 1.17
C9orf3-213ENST00000471978 PRAMEF10O60809 474 aa22.39■■□□□ 1.17
C9orf3-213ENST00000471978 TPM1P09493 284 aa22.39■■□□□ 1.17
C9orf3-213ENST00000471978 CD1CP29017 333 aa22.39■■□□□ 1.17
C9orf3-213ENST00000471978 IFI35P80217 286 aaPredicted RBP22.39■■□□□ 1.17
C9orf3-213ENST00000471978 LRP8Q14114 963 aa22.39■■□□□ 1.17
C9orf3-213ENST00000471978 C16orf72Q14CZ0 275 aa22.39■■□□□ 1.17
C9orf3-213ENST00000471978 TGIF1Q15583 401 aa22.39■■□□□ 1.17
C9orf3-213ENST00000471978 QPCTQ16769 361 aa22.39■■□□□ 1.17
C9orf3-213ENST00000471978 KIAA1614Q5VZ46 1190 aa22.39■■□□□ 1.17
C9orf3-213ENST00000471978 ZNF574Q6ZN55 896 aaPredicted RBP22.39■■□□□ 1.17
C9orf3-213ENST00000471978 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.39■■□□□ 1.17
C9orf3-213ENST00000471978 TTC9Q92623 222 aa22.39■■□□□ 1.17
C9orf3-213ENST00000471978 USP7Q93009 1102 aa22.39■■□□□ 1.17
C9orf3-213ENST00000471978 CHP1Q99653 195 aa22.39■■□□□ 1.17
C9orf3-213ENST00000471978 MLPHQ9BV36 600 aaPredicted RBP22.39■■□□□ 1.17
C9orf3-213ENST00000471978 ABHD10Q9NUJ1 306 aa22.39■■□□□ 1.17
C9orf3-213ENST00000471978 SPTLC3Q9NUV7 552 aa22.39■■□□□ 1.17
C9orf3-213ENST00000471978 ZNHIT2Q9UHR6 403 aa22.39■■□□□ 1.17
C9orf3-213ENST00000471978 AHCTF1Q8WYP5 2266 aa22.39■■□□□ 1.17
C9orf3-213ENST00000471978 ZNF487B1APH4 448 aa22.38■■□□□ 1.17
C9orf3-213ENST00000471978 ANKRD66B4E2M5 251 aa22.38■■□□□ 1.17
C9orf3-213ENST00000471978 ATP1A1P05023 1023 aaKnown RBP22.38■■□□□ 1.17
C9orf3-213ENST00000471978 ARHGAP25P42331 645 aa22.38■■□□□ 1.17
C9orf3-213ENST00000471978 SPINT3P49223 89 aa22.38■■□□□ 1.17
C9orf3-213ENST00000471978 AP1B1Q10567 949 aa22.38■■□□□ 1.17
C9orf3-213ENST00000471978 ZBTB17Q13105 803 aa22.38■■□□□ 1.17
C9orf3-213ENST00000471978 NKAIN2Q5VXU1 208 aa22.38■■□□□ 1.17
C9orf3-213ENST00000471978 SLC9A4Q6AI14 798 aa22.38■■□□□ 1.17
C9orf3-213ENST00000471978 VSTM4Q8IW00 320 aa22.38■■□□□ 1.17
C9orf3-213ENST00000471978 CNTD1Q8N815 330 aa22.38■■□□□ 1.17
C9orf3-213ENST00000471978 CCHCR1Q8TD31 782 aa22.38■■□□□ 1.17
C9orf3-213ENST00000471978 CCDC42Q96M95 316 aa22.38■■□□□ 1.17
C9orf3-213ENST00000471978 WDR24Q96S15 920 aa22.38■■□□□ 1.17
C9orf3-213ENST00000471978 MAK16Q9BXY0 300 aaKnown RBP22.38■■□□□ 1.17
C9orf3-213ENST00000471978 ADGRE3Q9BY15 652 aa22.38■■□□□ 1.17
C9orf3-213ENST00000471978 FAM83DQ9H4H8 585 aa22.38■■□□□ 1.17
C9orf3-213ENST00000471978 NHEJ1Q9H9Q4 299 aaPredicted RBP22.38■■□□□ 1.17
C9orf3-213ENST00000471978 PKD2L2Q9NZM6 624 aa22.38■■□□□ 1.17
C9orf3-213ENST00000471978 CNOT6Q9ULM6 557 aaKnown RBP22.38■■□□□ 1.17
C9orf3-213ENST00000471978 IGHV5-10-1A0A0J9YXX1 117 aa22.37■■□□□ 1.17
C9orf3-213ENST00000471978 C3orf70A6NLC5 250 aaPredicted RBP22.37■■□□□ 1.17
C9orf3-213ENST00000471978 EFSO43281 561 aa22.37■■□□□ 1.17
C9orf3-213ENST00000471978 LIPCP11150 499 aa22.37■■□□□ 1.17
C9orf3-213ENST00000471978 SKOR2Q2VWA4 1001 aaPredicted RBP22.37■■□□□ 1.17
C9orf3-213ENST00000471978 VSIG1Q86XK7 387 aa22.37■■□□□ 1.17
C9orf3-213ENST00000471978 RCBTB1Q8NDN9 531 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms