RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 VRTNQ9H8Y1 702 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 YAE1D1Q9NRH1 226 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 SUFUQ9UMX1 484 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 ARID1AO14497 2285 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 SEC16AO15027 2179 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 DYSFO75923 2080 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 O00370 1275 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 EIF3DO15371 548 aaKnown RBP eCLIP6.49□□□□□ -1.37
HDAC3-206ENST00000471968 TEX33O43247 280 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 HTRA2O43464 458 aaPredicted RBP6.49□□□□□ -1.37
HDAC3-206ENST00000471968 SMPD2O60906 423 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 CDC45O75419 566 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 EML2O95834 649 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 P4HA1P13674 534 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 ABOP16442 354 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 NELFEP18615 380 aaKnown RBP6.49□□□□□ -1.37
HDAC3-206ENST00000471968 ADCY8P40145 1251 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 KIR2DL3P43628 341 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 IRAK1P51617 712 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 DLX5P56178 289 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 GSDMDP57764 484 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 PMP22Q01453 160 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 AIMP2Q13155 320 aaKnown RBP6.49□□□□□ -1.37
HDAC3-206ENST00000471968 ORC2Q13416 577 aaPredicted RBP6.49□□□□□ -1.37
HDAC3-206ENST00000471968 BIRC3Q13489 604 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 NCF4Q15080 339 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 CYP2A13Q16696 494 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 RABGAP1LQ5R372 815 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 PLEKHS1Q5SXH7 462 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 L1TD1Q5T7N2 865 aaKnown RBP6.49□□□□□ -1.37
HDAC3-206ENST00000471968 TTC39BQ5VTQ0 682 aaPredicted RBP6.49□□□□□ -1.37
HDAC3-206ENST00000471968 ARSKQ6UWY0 536 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 PRSS57Q6UWY2 283 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 DOLPP1Q86YN1 238 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 DSELQ8IZU8 1212 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 PCDH20Q8N6Y1 951 aaKnown RBP6.49□□□□□ -1.37
HDAC3-206ENST00000471968 SIDT2Q8NBJ9 832 aaKnown RBP6.49□□□□□ -1.37
HDAC3-206ENST00000471968 CPLX3Q8WVH0 158 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 KLHL6Q8WZ60 621 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 ZNF516Q92618 1163 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 ZMYND19Q96E35 227 aaPredicted RBP6.49□□□□□ -1.37
HDAC3-206ENST00000471968 CDK5RAP3Q96JB5 506 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 NT5C1AQ9BXI3 368 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 UBXN6Q9BZV1 441 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 EPB41L1Q9H4G0 881 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 WDR26Q9H7D7 661 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 LRRC4Q9HBW1 653 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 CRIM1Q9NZV1 1036 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 TBC1D7Q9P0N9 293 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 RNF6Q9Y252 685 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 PADI2Q9Y2J8 665 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 FCF1Q9Y324 198 aaKnown RBP6.49□□□□□ -1.37
HDAC3-206ENST00000471968 VWFP04275 2813 aa6.49□□□□□ -1.37
HDAC3-206ENST00000471968 TRAV17A0A0B4J275 112 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 FAM227AF5H4B4 570 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 TULP2O00295 520 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 KRIT1O00522 736 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 CNOT4O95628 575 aaKnown RBP6.48□□□□□ -1.37
HDAC3-206ENST00000471968 APOEP02649 317 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 ERBB2P04626 1255 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 TP53P04637 393 aaPredicted RBP6.48□□□□□ -1.37
HDAC3-206ENST00000471968 CEACAM5P06731 702 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 EBLN1P0CF75 366 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 PVRP15151 417 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 GJB2P29033 226 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 NASPP49321 788 aaPredicted RBP6.48□□□□□ -1.37
HDAC3-206ENST00000471968 DLG4P78352 724 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 SSPNQ14714 243 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 IL17AQ16552 155 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 FAM174BQ3ZCQ3 159 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 TMEM52BQ4KMG9 183 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 TTC38Q5R3I4 469 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 CATSPEREQ5SY80 951 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 HYIQ5T013 277 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 PRAMEF13Q5VWM6 474 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 FAM92BQ6ZTR7 304 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 PRSS42Q7Z5A4 293 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 CCDC71Q8IV32 467 aaPredicted RBP6.48□□□□□ -1.37
HDAC3-206ENST00000471968 EID3Q8N140 333 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 LRRC75A-AS1Q8N1F1 130 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 SIX6OS1Q8N1H7 587 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 MAPK1IP1LQ8NDC0 245 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 MYRIPQ8NFW9 859 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 TATDN2Q93075 761 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 CLIP3Q96DZ5 547 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 SLC39A13Q96H72 371 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 RPRD1AQ96P16 312 aaPredicted RBP6.48□□□□□ -1.37
HDAC3-206ENST00000471968 STRA6Q9BX79 667 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.48□□□□□ -1.37
HDAC3-206ENST00000471968 TSPAN10Q9H1Z9 355 aaPredicted RBP6.48□□□□□ -1.37
HDAC3-206ENST00000471968 PLEKHF2Q9H8W4 249 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 MRPL44Q9H9J2 332 aaKnown RBP6.48□□□□□ -1.37
HDAC3-206ENST00000471968 SARS2Q9NP81 518 aaKnown RBP6.48□□□□□ -1.37
HDAC3-206ENST00000471968 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.48□□□□□ -1.37
HDAC3-206ENST00000471968 PLA2G3Q9NZ20 509 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 OGFRQ9NZT2 677 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 TLR6Q9Y2C9 796 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 ANKRD36A6QL64 1941 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 USF3Q68DE3 2245 aa6.48□□□□□ -1.37
HDAC3-206ENST00000471968 CMYA5Q8N3K9 4069 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms