RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 FKBP6O75344 327 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 KRT34O76011 436 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 PDE5AO76074 875 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 CRTAMO95727 393 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 TIMP1P01033 207 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 PDHA1P08559 390 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 MTHFD2P13995 350 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 HNRNPLP14866 589 aaKnown RBP eCLIP6.4□□□□□ -1.39
SPEN-204ENST00000471538 RAG1P15918 1043 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 CD9P21926 228 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 ZXDBP98169 803 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 TBL3Q12788 808 aaKnown RBP6.4□□□□□ -1.39
SPEN-204ENST00000471538 TRAF2Q12933 501 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 ZNF177Q13360 481 aaPredicted RBP6.4□□□□□ -1.39
SPEN-204ENST00000471538 CUL3Q13618 768 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 ADGRE1Q14246 886 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 PTK2BQ14289 1009 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 SUZ12Q15022 739 aaKnown RBP6.4□□□□□ -1.39
SPEN-204ENST00000471538 OR4D1Q15615 310 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 UGT3A2Q3SY77 523 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 C6orf163Q5TEZ5 329 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 C1orf146Q5VVC0 180 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 RNF219Q5W0B1 726 aaPredicted RBP6.4□□□□□ -1.39
SPEN-204ENST00000471538 NCEH1Q6PIU2 408 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 AFTPHQ6ULP2 937 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 RPS27LQ71UM5 84 aaKnown RBP6.4□□□□□ -1.39
SPEN-204ENST00000471538 METTL3Q86U44 580 aaKnown RBP6.4□□□□□ -1.39
SPEN-204ENST00000471538 SNX32Q86XE0 403 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 RNF135Q8IUD6 432 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 KBTBD2Q8IY47 623 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 DEFB107AQ8IZN7 70 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 FBXW8Q8N3Y1 598 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 TTC30BQ8N4P2 665 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 TMEM199Q8N511 208 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 RHEBL1Q8TAI7 183 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 DTX3LQ8TDB6 740 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 DNAJC9Q8WXX5 260 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 JADE3Q92613 823 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 N4BP2L2Q92802 583 aaPredicted RBP6.4□□□□□ -1.39
SPEN-204ENST00000471538 STMN2Q93045 179 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 TOP1MTQ969P6 601 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 FAM136AQ96C01 138 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 EXOC2Q96KP1 924 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 CATSPER2Q96P56 530 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 SMIM14Q96QK8 99 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 ATOH8Q96SQ7 321 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 SPON2Q9BUD6 331 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 NACA2Q9H009 215 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 TFB2MQ9H5Q4 396 aaKnown RBP6.4□□□□□ -1.39
SPEN-204ENST00000471538 ALG9Q9H6U8 611 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 YY1AP1Q9H869 796 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 CYP4F11Q9HBI6 524 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 EML4Q9HC35 981 aaKnown RBP6.4□□□□□ -1.39
SPEN-204ENST00000471538 CYP4F12Q9HCS2 524 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 S100A14Q9HCY8 104 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 ZNF334Q9HCZ1 680 aaPredicted RBP6.4□□□□□ -1.39
SPEN-204ENST00000471538 ATP13A2Q9NQ11 1180 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 IKZF3Q9UKT9 509 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 ANGPTL2Q9UKU9 493 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 PPM1HQ9ULR3 514 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 PRPF19Q9UMS4 504 aaKnown RBP6.4□□□□□ -1.39
SPEN-204ENST00000471538 POMPQ9Y244 141 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 CRYL1Q9Y2S2 319 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 RAI2Q9Y5P3 530 aa6.4□□□□□ -1.39
SPEN-204ENST00000471538 OAS3Q9Y6K5 1087 aaKnown RBP6.4□□□□□ -1.39
SPEN-204ENST00000471538 PTPRSQ13332 1948 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 SCN8AQ9UQD0 1980 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 CCDC189A1A4V9 331 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 LCHNA4D1U4 455 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 GRXCR1A8MXD5 290 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 H3BNX3 289 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 LIN7AO14910 233 aaPredicted RBP6.39□□□□□ -1.39
SPEN-204ENST00000471538 KLK8O60259 260 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 TSPAN3O60637 253 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 SNAP91O60641 907 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 LILRB3O75022 631 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 TMCC1O94876 653 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 UPP2O95045 317 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 TSPAN12O95859 305 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 SLC4A1P02730 911 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 IRF1P10914 325 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 ARSAP15289 507 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 MZF1P28698 734 aaPredicted RBP6.39□□□□□ -1.39
SPEN-204ENST00000471538 DPP6P42658 865 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 ALDH1A3P47895 512 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 PSMD8P48556 350 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 ATP4BP51164 291 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 SCNN1BP51168 640 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 PLK1P53350 603 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 SESN3P58005 492 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 AP2B1P63010 937 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 HERVK_113P63132 956 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 TWF1Q12792 350 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 PPIGQ13427 754 aaKnown RBP eCLIP6.39□□□□□ -1.39
SPEN-204ENST00000471538 CYLC2Q14093 348 aaPredicted RBP6.39□□□□□ -1.39
SPEN-204ENST00000471538 IKBKEQ14164 716 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 CCDC6Q16204 474 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 INO80DQ53TQ3 878 aaPredicted RBP6.39□□□□□ -1.39
SPEN-204ENST00000471538 PIGGQ5H8A4 983 aa6.39□□□□□ -1.39
SPEN-204ENST00000471538 DENND4CQ5VZ89 1909 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms