RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 TSPAN11A1L157 253 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 PPP1R3GB7ZBB8 358 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 SPAG6O75602 509 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 ATP1A1P05023 1023 aaKnown RBP6.82□□□□□ -1.32
HDAC1-204ENST00000471488 IVLP07476 585 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 GM2AP17900 193 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 NFKBIAP25963 317 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 VIPR1P32241 457 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 CLCN1P35523 988 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 PTGIRP43119 386 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 MTIF2P46199 727 aaKnown RBP6.82□□□□□ -1.32
HDAC1-204ENST00000471488 GLRBP48167 497 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 ARL4DP49703 201 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 PAPOLAP51003 745 aaKnown RBP6.82□□□□□ -1.32
HDAC1-204ENST00000471488 TPI1P60174 286 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 PDE1BQ01064 536 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 MAP7Q14244 749 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 SEPT7Q16181 437 aaKnown RBP6.82□□□□□ -1.32
HDAC1-204ENST00000471488 CNGA3Q16281 694 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 ZXDCQ2QGD7 858 aaPredicted RBP6.82□□□□□ -1.32
HDAC1-204ENST00000471488 PLA2G4EQ3MJ16 856 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 PARP15Q460N3 678 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 CCDC14Q49A88 953 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 CRTC2Q53ET0 693 aaPredicted RBP6.82□□□□□ -1.32
HDAC1-204ENST00000471488 ARTNQ5T4W7 220 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 MANEALQ5VSG8 457 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 CACHD1Q5VU97 1274 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 FAM69BQ5VUD6 431 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 SP5Q6BEB4 398 aaPredicted RBP6.82□□□□□ -1.32
HDAC1-204ENST00000471488 TTI2Q6NXR4 508 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 SLFN11Q7Z7L1 901 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 PPP1R3BQ86XI6 285 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 APLFQ8IW19 511 aaPredicted RBP6.82□□□□□ -1.32
HDAC1-204ENST00000471488 RHOT1Q8IXI2 618 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 IQCKQ8N0W5 287 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 SFRP1Q8N474 314 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 RTL3Q8N8U3 475 aaKnown RBP6.82□□□□□ -1.32
HDAC1-204ENST00000471488 FDCSPQ8NFU4 85 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 JOSD2Q8TAC2 188 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 SLC30A5Q8TAD4 765 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 MR1Q95460 341 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 SNRNP40Q96DI7 357 aaKnown RBP6.82□□□□□ -1.32
HDAC1-204ENST00000471488 COQ10AQ96MF6 247 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 C11orf70Q9BRQ4 267 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 MLPHQ9BV36 600 aaPredicted RBP6.82□□□□□ -1.32
HDAC1-204ENST00000471488 TEX101Q9BY14 249 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.82□□□□□ -1.32
HDAC1-204ENST00000471488 NOL6Q9H6R4 1146 aaKnown RBP6.82□□□□□ -1.32
HDAC1-204ENST00000471488 RUBCNLQ9H714 662 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 LHX9Q9NQ69 397 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 TBC1D29Q9UFV1 150 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 PCDHGC4Q9Y5F7 938 aa6.82□□□□□ -1.32
HDAC1-204ENST00000471488 CXorf51AA0A1B0GTR3 108 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 CFAP69A5D8W1 941 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 ARHGAP42A6NI28 874 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 DDX3YO15523 660 aaKnown RBP6.81□□□□□ -1.32
HDAC1-204ENST00000471488 LRRTM2O43300 516 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 KIF1CO43896 1103 aaKnown RBP6.81□□□□□ -1.32
HDAC1-204ENST00000471488 HEXIM1O94992 359 aaKnown RBP6.81□□□□□ -1.32
HDAC1-204ENST00000471488 FGFR1OPO95684 399 aaKnown RBP6.81□□□□□ -1.32
HDAC1-204ENST00000471488 MT-ND3P03897 115 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 MMEP08473 750 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 CYP2A6P11509 494 aaPredicted RBP6.81□□□□□ -1.32
HDAC1-204ENST00000471488 CYP11B1P15538 503 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 TNFAIP3P21580 790 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 VARSP26640 1264 aaKnown RBP6.81□□□□□ -1.32
HDAC1-204ENST00000471488 PTPN4P29074 926 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 FASLGP48023 281 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 PER3P56645 1201 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 YBEYP58557 167 aaPredicted RBP6.81□□□□□ -1.32
HDAC1-204ENST00000471488 BPIFB4P59827 614 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 SQSTM1Q13501 440 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 TUBB3Q13509 450 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 IL10RAQ13651 578 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 ZNF235Q14590 738 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 KCNAB1Q14722 419 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 UGT8Q16880 541 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 TPD52L1Q16890 204 aaPredicted RBP6.81□□□□□ -1.32
HDAC1-204ENST00000471488 PYCR3Q53H96 274 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 COBLL1Q53SF7 1204 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 ERICH6BQ5W0A0 696 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 AFMIDQ63HM1 303 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 RFLNAQ6ZTI6 216 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 TSPAN33Q86UF1 283 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 SLC34A3Q8N130 599 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 LZTR1Q8N653 840 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 Q8NA96 180 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 THAP4Q8WY91 577 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 SCAMP4Q969E2 229 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 AP2M1Q96CW1 435 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 DTD2Q96FN9 168 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 C9orf72Q96LT7 481 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 SELENOOQ9BVL4 669 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 NUDT9Q9BW91 350 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 AKIRIN1Q9H9L7 192 aaPredicted RBP6.81□□□□□ -1.32
HDAC1-204ENST00000471488 PDE7BQ9NP56 450 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 ARFGAP3Q9NP61 516 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 SEPT11Q9NVA2 429 aaKnown RBP6.81□□□□□ -1.32
HDAC1-204ENST00000471488 TMEM51Q9NW97 253 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 GPATCH2LQ9NWQ4 482 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms