RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 CYP1B1Q16678 543 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 PARP15Q460N3 678 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 CERCAMQ5T4B2 595 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 KCTD16Q68DU8 428 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 NCBP2-AS2Q69YL0 99 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 ERAP2Q6P179 960 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 BRAT1Q6PJG6 821 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 OGFOD3Q6PK18 319 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 TMCO3Q6UWJ1 677 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 USP53Q70EK8 1073 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 BZW1Q7L1Q6 419 aaKnown RBP9.08□□□□□ -0.96
SF3A1-206ENST00000471037 RD3Q7Z3Z2 195 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 SPRED1Q7Z699 444 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 CTAGE6Q86UF2 777 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 DTX1Q86Y01 620 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 ZNF354CQ86Y25 554 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 CCNJLQ8IV13 435 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 SLITRK4Q8IW52 837 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 CTAGE4Q8IX94 777 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 UMODL1-AS1Q8N2C9 162 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 LZTR1Q8N653 840 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 PQLC3Q8N755 202 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 PLD5Q8N7P1 536 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 SPATA4Q8NEY3 305 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 P3H4Q92791 437 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 HMCESQ96FZ2 354 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 ZNF641Q96N77 438 aaPredicted RBP9.08□□□□□ -0.96
SF3A1-206ENST00000471037 RUNDC3BQ96NL0 473 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 SEMA3CQ99985 751 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 CARD6Q9BX69 1037 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 FAM117AQ9C073 453 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 B3GNT4Q9C0J1 378 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 KLC2Q9H0B6 622 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 SUV39H2Q9H5I1 410 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 PDFQ9HBH1 243 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 PCDH12Q9NPG4 1184 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 SMARCAL1Q9NZC9 954 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 PISDQ9UG56 409 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 OR1A2Q9Y585 309 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 HEMK1Q9Y5R4 338 aaPredicted RBP9.08□□□□□ -0.96
SF3A1-206ENST00000471037 PIEZO2Q9H5I5 2752 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 SCN8AQ9UQD0 1980 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 AHCTF1Q8WYP5 2266 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 TCRBV7S2A1N4TA0A589 114 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.07□□□□□ -0.96
SF3A1-206ENST00000471037 TNFRSF10CO14798 259 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 NUDT21O43809 227 aaKnown RBP9.07□□□□□ -0.96
SF3A1-206ENST00000471037 PHF2O75151 1096 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 ZNF189O75820 626 aaPredicted RBP9.07□□□□□ -0.96
SF3A1-206ENST00000471037 SLU7O95391 586 aaKnown RBP9.07□□□□□ -0.96
SF3A1-206ENST00000471037 TNFP01375 233 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 HOXC4P09017 264 aaPredicted RBP9.07□□□□□ -0.96
SF3A1-206ENST00000471037 SFTPCP11686 197 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 ITIH1P19827 911 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 CD82P27701 267 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 FNTAP49354 379 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 LIG3P49916 1009 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 DYNLT1P63172 113 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 TUBB4BP68371 445 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 ADCY2Q08462 1091 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 HLTFQ14527 1009 aaKnown RBP eCLIP9.07□□□□□ -0.96
SF3A1-206ENST00000471037 NOMO1Q15155 1222 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 CYTH1Q15438 398 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 CCNG2Q16589 344 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 C14orf28Q4W4Y0 310 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 DRICH1Q6PGQ1 229 aaPredicted RBP9.07□□□□□ -0.96
SF3A1-206ENST00000471037 ZSWIM9Q86XI8 627 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 PRELID2Q8N945 189 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 NETO2Q8NC67 525 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 OR56A4Q8NGH8 313 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 ACTL9Q8TC94 416 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 OR1E3Q8WZA6 343 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 EXTL1Q92935 676 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 EXOC2Q96KP1 924 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 TUBGCP5Q96RT8 1024 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 CMKLR1Q99788 373 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 ARHGAP9Q9BRR9 750 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 AP1M1Q9BXS5 423 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 LRRC19Q9H756 370 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 FGF22Q9HCT0 170 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 SEPT10Q9P0V9 454 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 UBA2Q9UBT2 640 aaPredicted RBP9.07□□□□□ -0.96
SF3A1-206ENST00000471037 IL17BQ9UHF5 180 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 ATP8A1Q9Y2Q0 1164 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 PCDHGA4Q9Y5G9 962 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 HECTD1Q9ULT8 2610 aa9.07□□□□□ -0.96
SF3A1-206ENST00000471037 SPTA1P02549 2419 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 LRRK1Q38SD2 2015 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 PRAMEF33A0A0G2JMD5 474 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 TMEM202A6NGA9 273 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 HACD1B0YJ81 288 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 CACNB4O00305 520 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-206ENST00000471037 PPP1R12AO14974 1030 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-206ENST00000471037 SUV39H1O43463 412 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 MFSD11O43934 449 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 PRAMEF10O60809 474 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 RECQL5O94762 991 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-206ENST00000471037 PCCBP05166 539 aa9.06□□□□□ -0.96
SF3A1-206ENST00000471037 PECAM1P16284 738 aaPredicted RBP9.06□□□□□ -0.96
SF3A1-206ENST00000471037 MX2P20592 715 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms