RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 SPAG6O75602 509 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 SRP72O76094 671 aaKnown RBP11.2□□□□□ -0.62
SREBF1-209ENST00000470247 SHBGP04278 402 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 UGT1A6P19224 532 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 UGT1A1P22309 533 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 UGT1A4P22310 534 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 GABRB3P28472 473 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 MAT2AP31153 395 aaKnown RBP11.2□□□□□ -0.62
SREBF1-209ENST00000470247 MC4RP32245 332 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 UGT1A3P35503 534 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 UGT1A5P35504 534 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 SPAM1P38567 509 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 CCR5P51681 352 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 CSTF1Q05048 431 aaKnown RBP11.2□□□□□ -0.62
SREBF1-209ENST00000470247 SMAD1Q15797 465 aaKnown RBP11.2□□□□□ -0.62
SREBF1-209ENST00000470247 ATP13A5Q4VNC0 1218 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 USP39Q53GS9 565 aaKnown RBP11.2□□□□□ -0.62
SREBF1-209ENST00000470247 HSP90AA5PQ58FG0 334 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 ZDHHC20Q5W0Z9 365 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 ALS2CLQ60I27 953 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 KIAA0895LQ68EN5 471 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 PDPK2PQ6A1A2 396 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 PSAPL1Q6NUJ1 521 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 NEPROQ6NW34 567 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 ZNF449Q6P9G9 518 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 FAM151BQ6UXP7 276 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 KDM7AQ6ZMT4 941 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 PTAR1Q7Z6K3 402 aaPredicted RBP11.2□□□□□ -0.62
SREBF1-209ENST00000470247 KCNMB4Q86W47 210 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 CNTN4Q8IWV2 1026 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 IQCKQ8N0W5 287 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 TP53I13Q8NBR0 393 aaPredicted RBP11.2□□□□□ -0.62
SREBF1-209ENST00000470247 PLA2G15Q8NCC3 412 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 GPR150Q8NGU9 434 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 OR4L1Q8NH43 312 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 UHMK1Q8TAS1 419 aaKnown RBP11.2□□□□□ -0.62
SREBF1-209ENST00000470247 ZNF398Q8TD17 642 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 LENG8Q96PV6 779 aaPredicted RBP11.2□□□□□ -0.62
SREBF1-209ENST00000470247 CDH19Q9H159 772 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 UGT1A7Q9HAW7 530 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 UGT1A10Q9HAW8 530 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 UGT1A8Q9HAW9 530 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 C20orf96Q9NUD7 363 aaPredicted RBP11.2□□□□□ -0.62
SREBF1-209ENST00000470247 SLC17A6Q9P2U8 582 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 NFS1Q9Y697 457 aa11.2□□□□□ -0.62
SREBF1-209ENST00000470247 GLYATL1P3A0A0U1RQE8 302 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 METTL12A8MUP2 240 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 SLC31A1O15431 190 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 HRO43593 1189 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 PRAMEF1O95521 474 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 S1PR4O95977 384 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 F7P08709 466 aaPredicted RBP11.19□□□□□ -0.62
SREBF1-209ENST00000470247 PAMP19021 973 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 GCAP28676 217 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 PRAMEP78395 509 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 MGAT5Q09328 741 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 NFATC2Q13469 925 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 EFTUD2Q15029 972 aaKnown RBP eCLIP11.19□□□□□ -0.624e-12■■■■□ 23.4
SREBF1-209ENST00000470247 KBTBD12Q3ZCT8 623 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 AFTPHQ6ULP2 937 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 LDB1Q86U70 411 aaPredicted RBP11.19□□□□□ -0.62
SREBF1-209ENST00000470247 LONP2Q86WA8 852 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 SLC41A1Q8IVJ1 513 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 DENND6AQ8IWF6 608 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 TRAM1L1Q8N609 369 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 OR6P1Q8NGX9 317 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 UBLCP1Q8WVY7 318 aaPredicted RBP11.19□□□□□ -0.62
SREBF1-209ENST00000470247 BIRC7Q96CA5 298 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 AP2M1Q96CW1 435 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 NUS1Q96E22 293 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 BMFQ96LC9 184 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 MCMBPQ9BTE3 642 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 FAM96AQ9H5X1 160 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 ACSS3Q9H6R3 686 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 RAD18Q9NS91 495 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 IARS2Q9NSE4 1012 aaKnown RBP11.19□□□□□ -0.62
SREBF1-209ENST00000470247 APPL1Q9UKG1 709 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 FNDC3AQ9Y2H6 1198 aaKnown RBP11.19□□□□□ -0.62
SREBF1-209ENST00000470247 PSAT1Q9Y617 370 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 SLCO1B1Q9Y6L6 691 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 PLXND1Q9Y4D7 1925 aa11.19□□□□□ -0.62
SREBF1-209ENST00000470247 ZNF318Q5VUA4 2279 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 A0A087WUV0 522 aaPredicted RBP11.18□□□□□ -0.62
SREBF1-209ENST00000470247 PRR33A8MZF0 331 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 CD3EAPO15446 510 aaKnown RBP11.18□□□□□ -0.62
SREBF1-209ENST00000470247 NUDT17P0C025 328 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 SP9P0CG40 484 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 STX2P32856 288 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 IGFALSP35858 605 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 TRIM23P36406 574 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 CACNG1Q06432 222 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 SRSF5Q13243 272 aaKnown RBP11.18□□□□□ -0.62
SREBF1-209ENST00000470247 SGCGQ13326 291 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 CTBP1Q13363 440 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 LRRC14Q15048 493 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 IRF4Q15306 451 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 TYSND1Q2T9J0 566 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 GPR33Q49SQ1 333 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 ZNF789Q5FWF6 425 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 PNCKQ6P2M8 343 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms