RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 SARNPP82979 210 aaKnown RBP11.88□□□□□ -0.51
VPS13D-204ENST00000469054 SLC14A1Q13336 389 aa11.88□□□□□ -0.51
VPS13D-204ENST00000469054 TUBB2AQ13885 445 aa11.88□□□□□ -0.51
VPS13D-204ENST00000469054 SHBQ15464 509 aa11.88□□□□□ -0.51
VPS13D-204ENST00000469054 WHAMMP3Q1A5X7 153 aa11.88□□□□□ -0.51
VPS13D-204ENST00000469054 UAP1L1Q3KQV9 507 aa11.88□□□□□ -0.51
VPS13D-204ENST00000469054 ZNF542PQ5EBM4 170 aa11.88□□□□□ -0.51
VPS13D-204ENST00000469054 CERCAMQ5T4B2 595 aa11.88□□□□□ -0.51
VPS13D-204ENST00000469054 ANKRD22Q5VYY1 191 aa11.88□□□□□ -0.51
VPS13D-204ENST00000469054 PDPK2PQ6A1A2 396 aa11.88□□□□□ -0.51
VPS13D-204ENST00000469054 LRRC8BQ6P9F7 803 aa11.88□□□□□ -0.51
VPS13D-204ENST00000469054 JAMLQ86YT9 394 aa11.88□□□□□ -0.51
VPS13D-204ENST00000469054 OR4K2Q8NGD2 314 aa11.88□□□□□ -0.51
VPS13D-204ENST00000469054 STYXQ8WUJ0 223 aa11.88□□□□□ -0.51
VPS13D-204ENST00000469054 COX14Q96I36 57 aa11.88□□□□□ -0.51
VPS13D-204ENST00000469054 TUBB2BQ9BVA1 445 aa11.88□□□□□ -0.51
VPS13D-204ENST00000469054 DNAJC28Q9NX36 388 aa11.88□□□□□ -0.51
VPS13D-204ENST00000469054 ASIC3Q9UHC3 531 aa11.88□□□□□ -0.51
VPS13D-204ENST00000469054 KLF15Q9UIH9 416 aa11.88□□□□□ -0.51
VPS13D-204ENST00000469054 CNOT6Q9ULM6 557 aaKnown RBP11.88□□□□□ -0.51
VPS13D-204ENST00000469054 PCDHGB2Q9Y5G2 931 aa11.88□□□□□ -0.51
VPS13D-204ENST00000469054 PCDH15Q96QU1 1955 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 DOCK9Q9BZ29 2069 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 GLYATL1P3A0A0U1RQE8 302 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 HEATR9A2RTY3 570 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 TNFRSF10CO14798 259 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 INPP4BO15327 924 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 TTI1O43156 1089 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 JUNDP17535 347 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 ADRA1DP25100 572 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 IVDP26440 423 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 EPHA8P29322 1005 aaPredicted RBP11.87□□□□□ -0.51
VPS13D-204ENST00000469054 HADHAP40939 763 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 NPY2RP49146 381 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 BLKP51451 505 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 SESN2P58004 480 aaPredicted RBP11.87□□□□□ -0.51
VPS13D-204ENST00000469054 SRP54P61011 504 aaKnown RBP11.87□□□□□ -0.51
VPS13D-204ENST00000469054 HNRNPKP61978 463 aaKnown RBP eCLIP11.87□□□□□ -0.51
VPS13D-204ENST00000469054 IL9RQ01113 521 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 PPARDQ03181 441 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 C2orf54Q08AI8 447 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 BNIP3Q12983 259 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 LAMB3Q13751 1172 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 SEPT6Q14141 434 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 SUZ12Q15022 739 aaKnown RBP11.87□□□□□ -0.51
VPS13D-204ENST00000469054 CHRNA6Q15825 494 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 CCDC38Q502W7 563 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 DBX2Q6ZNG2 339 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 ZNF534Q76KX8 674 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 MAATS1Q7Z4T9 603 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 PCGF5Q86SE9 256 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 NAT8LQ8N9F0 302 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 MCUQ8NE86 351 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 OR56A4Q8NGH8 313 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 OR13C4Q8NGS5 318 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 SAP25Q8TEE9 199 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 BTN2A2Q8WVV5 523 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 TSACCQ96A04 125 aaPredicted RBP11.87□□□□□ -0.51
VPS13D-204ENST00000469054 HIC2Q96JB3 615 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 RANBP9Q96S59 729 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 FGF22Q9HCT0 170 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 BFARQ9NZS9 450 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 KLQ9UEF7 1012 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 FKBPLQ9UIM3 349 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 APPL1Q9UKG1 709 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 CDV3Q9UKY7 258 aaKnown RBP11.87□□□□□ -0.51
VPS13D-204ENST00000469054 PNMA8BQ9ULN7 279 aaPredicted RBP11.87□□□□□ -0.51
VPS13D-204ENST00000469054 MRFAP1Q9Y605 127 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 PLXNA2O75051 1894 aa11.87□□□□□ -0.51
VPS13D-204ENST00000469054 PI4KAP42356 2102 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 CACNA1EQ15878 2313 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 KNL1Q8NG31 2342 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 GVINP1Q7Z2Y8 2422 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 MROH6A6NGR9 719 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 H3BM21 787 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 DNALI1O14645 258 aaPredicted RBP11.86□□□□□ -0.51
VPS13D-204ENST00000469054 SLC30A4O14863 429 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 SDC3O75056 442 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 PIAS2O75928 621 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 TMEM63AO94886 807 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 RASGRP1O95267 797 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 TNFP01375 233 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 CEACAM5P06731 702 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 MLNP12872 115 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 CD59P13987 128 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 SDHBP21912 280 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 PSMA3P25788 255 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 HK3P52790 923 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 TMPRSS15P98073 1019 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 XIAPP98170 497 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 ITGA9Q13797 1035 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 SKIDA1Q1XH10 827 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 RSPO4Q2I0M5 234 aaPredicted RBP11.86□□□□□ -0.51
VPS13D-204ENST00000469054 ALG11Q2TAA5 492 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 ATP13A5Q4VNC0 1218 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 PCID2Q5JVF3 399 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 RNASEH2BQ5TBB1 312 aaKnown RBP11.86□□□□□ -0.51
VPS13D-204ENST00000469054 FAM151BQ6UXP7 276 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 TRIM74Q86UV6 250 aa11.86□□□□□ -0.51
VPS13D-204ENST00000469054 CAND1Q86VP6 1230 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms