RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 ASB2Q96Q27 587 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 KCNA7Q96RP8 456 aa15.75■□□□□ 0.11
TSPAN4-211ENST00000468468 CD3EAPO15446 510 aaKnown RBP15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 MAGEB3O15480 346 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 CDH15P55291 814 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 TIAL1Q01085 375 aaKnown RBP eCLIP15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 SLC39A12Q504Y0 691 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 PRMT9Q6P2P2 845 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 ZNF598Q86UK7 904 aaKnown RBP15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 ZNF280BQ86YH2 543 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 FIBCD1Q8N539 461 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 BLOC1S5Q8TDH9 187 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 TRPC4APQ8TEL6 797 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 TFAP2CQ92754 450 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 TUBGCP3Q96CW5 907 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 SLC39A13Q96H72 371 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 TRIM15Q9C019 465 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 CLK4Q9HAZ1 481 aaKnown RBP15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 TIMMDC1Q9NPL8 285 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 TMEM248Q9NWD8 314 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 ABI2Q9NYB9 513 aaPredicted RBP15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 ABCD2Q9UBJ2 740 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 ARL5AQ9Y689 179 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 TTC3P53804 2025 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 TDRD15B5MCY1 1934 aaKnown RBP15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 LOC285095A0A1B0GVY8 99 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 DHRS12A0PJE2 317 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 FAM149AA5PLN7 773 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 SUPT3HO75486 399 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 GJB3O75712 270 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 LINC00032P0C843 101 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 CDK4P11802 303 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 CKBP12277 381 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 UGT1A6P19224 532 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 HPCAP84074 193 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 MBTPS1Q14703 1052 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 RPS6KA2Q15349 733 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 RNF180Q86T96 592 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 CBR4Q8N4T8 237 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 MINDY1Q8N5J2 469 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 TEX26Q8N6G2 289 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 FATE1Q969F0 183 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 SUSD3Q96L08 255 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 SLC8A2Q9UPR5 921 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 THSD7BQ9C0I4 1608 aa15.74■□□□□ 0.11
TSPAN4-211ENST00000468468 AQP12BA6NM10 295 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 TPST1O60507 370 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 MTHFD2P13995 350 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 GFAPP14136 432 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 IL10P22301 178 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 RPL10P27635 214 aaKnown RBP15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 ATP6V0D1P61421 351 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 YWHAHQ04917 246 aaPredicted RBP15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 CBX3Q13185 183 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 SEMA3AQ14563 771 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 INPP5AQ14642 412 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 FAM26DQ5JW98 314 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 KANK2Q63ZY3 851 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 LPCAT2Q7L5N7 544 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 PHYKPLQ8IUZ5 450 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 AQP12AQ8IXF9 295 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 HM13Q8TCT9 377 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 CD99L2Q8TCZ2 262 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 CCDC97Q96F63 343 aaPredicted RBP15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 TUBB1Q9H4B7 451 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 CMTM6Q9NX76 183 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 BTRCQ9Y297 605 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 SQORQ9Y6N5 450 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 NLRC5Q86WI3 1866 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 A0A0J9YVX5 310 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 CCDC162PA2VCL2 907 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 H3BMM5 538 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 HNRNPCP07910 306 aaKnown RBP eCLIP15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 HGFP14210 728 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 ZNF37AP17032 561 aaPredicted RBP15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 LBPP18428 481 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 CHRM3P20309 590 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 CDK9P50750 372 aaKnown RBP15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 YBX1P67809 324 aaKnown RBP15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 MRNIPQ6NTE8 343 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 MSANTD2Q6P1R3 559 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 MON1AQ86VX9 555 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 ARL10Q8N8L6 244 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 TADA1Q96BN2 335 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 SEMA3CQ99985 751 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 GID8Q9NWU2 228 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 PTPRDP23468 1912 aa15.73■□□□□ 0.11
TSPAN4-211ENST00000468468 HSD17B1P14061 328 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 GPR15P49685 360 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 TUBA4AP68366 448 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 EFEMP1Q12805 493 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 DDR2Q16832 855 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 CAMK1DQ8IU85 385 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 ERI1Q8IV48 349 aaKnown RBP15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 OR13C4Q8NGS5 318 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 LINC01599Q8WXQ3 324 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 IGSF8Q969P0 613 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 LIN28AQ9H9Z2 209 aaKnown RBP15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 SRRDQ9UH36 339 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms