RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 BCAT2O15382 392 aaPredicted RBP15.13■□□□□ 0.01
SNIP1-202ENST00000468040 BANF1O75531 89 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 SRP72O76094 671 aaKnown RBP15.13■□□□□ 0.01
SNIP1-202ENST00000468040 TUBBP07437 444 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 ITGALP20701 1170 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 ITPKAP23677 461 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 NMBRP28336 390 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 IGFALSP35858 605 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 OVGP1Q12889 678 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 INPP5AQ14642 412 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 ERCC6LQ2NKX8 1250 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 ANKRD20A4Q4UJ75 823 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 SPANXN3Q5MJ09 141 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 AFTPHQ6ULP2 937 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 ADAMTSL4Q6UY14 1074 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 GCNT7Q6ZNI0 430 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 RABEPKQ7Z6M1 372 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 ABI3BPQ7Z7G0 1075 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 SYT12Q8IV01 421 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 ANKMY2Q8IV38 441 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 FBXO36Q8NEA4 188 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 C1orf216Q8TAB5 229 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 SKA1Q96BD8 255 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 ZNF669Q96BR6 464 aaPredicted RBP15.13■□□□□ 0.01
SNIP1-202ENST00000468040 SLC6A18Q96N87 628 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 SLC2A6Q9UGQ3 507 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.13■□□□□ 0.01
SNIP1-202ENST00000468040 PILRBQ9UKJ0 227 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 SLC30A1Q9Y6M5 507 aa15.13■□□□□ 0.01
SNIP1-202ENST00000468040 V9GYY5 206 aaPredicted RBP15.13■□□□□ 0.01
SNIP1-202ENST00000468040 A0A1B0GTW7 788 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 K7ESM1 405 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 CCL22O00626 93 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 SOD1P00441 154 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 MC4RP32245 332 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 TRIM23P36406 574 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 RABIFP47224 123 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 ARSDP51689 593 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 AFF3P51826 1226 aaKnown RBP15.12■□□□□ 0.01
SNIP1-202ENST00000468040 CLDN2P57739 230 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 PFN3P60673 137 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 YPEL5P62699 121 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 XIAPP98170 497 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 CRYMQ14894 314 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 FASTKD3Q14CZ7 662 aaKnown RBP15.12■□□□□ 0.01
SNIP1-202ENST00000468040 TEAD4Q15561 434 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 CHRNA6Q15825 494 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 GPR33Q49SQ1 333 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 HP1BP3Q5SSJ5 553 aaPredicted RBP15.12■□□□□ 0.01
SNIP1-202ENST00000468040 PEAR1Q5VY43 1037 aaPredicted RBP15.12■□□□□ 0.01
SNIP1-202ENST00000468040 LAIR1Q6GTX8 287 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 KIAA0930Q6ICG6 404 aaPredicted RBP15.12■□□□□ 0.01
SNIP1-202ENST00000468040 WDR93Q6P2C0 686 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 CES3Q6UWW8 571 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 IQCHQ86VS3 1027 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 RELL1Q8IUW5 271 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 IGDCC3Q8IVU1 814 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 MFSD2AQ8NA29 543 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.12■□□□□ 0.01
SNIP1-202ENST00000468040 PLA2G15Q8NCC3 412 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 OR6P1Q8NGX9 317 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 PIGKQ92643 395 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 HDAC10Q969S8 669 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 SGSM3Q96HU1 749 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 BMFQ96LC9 184 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 TBATAQ96M53 351 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 VPS35Q96QK1 796 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 WDR26Q9H7D7 661 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 TM9SF3Q9HD45 589 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 SMG5Q9UPR3 1016 aaKnown RBP15.12■□□□□ 0.01
SNIP1-202ENST00000468040 PCDHGA5Q9Y5G8 931 aa15.12■□□□□ 0.01
SNIP1-202ENST00000468040 TNRC6BQ9UPQ9 1833 aaKnown RBP15.11■□□□□ 0.01
SNIP1-202ENST00000468040 SPAG17Q6Q759 2223 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 ZCWPW2A0A1B0GU75 182 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 CCDC162PA2VCL2 907 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 POM121BA6NF01 834 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 FADS2P1A8MWK0 482 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 CACNB4O00305 520 aaPredicted RBP15.11■□□□□ 0.01
SNIP1-202ENST00000468040 GAPDHSO14556 408 aaPredicted RBP15.11■□□□□ 0.01
SNIP1-202ENST00000468040 MAGEC1O60732 1142 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 EPN2O95208 641 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 VAPBO95292 243 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 CD38P28907 300 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 NBL1P41271 181 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 MAGEA4P43358 317 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 CDK3Q00526 305 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 CACNG1Q06432 222 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 NFATC2Q13469 925 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 PEX6Q13608 980 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 SLMAPQ14BN4 828 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 LPAL2Q16609 132 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 LONRF1Q17RB8 773 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 STEAP4Q687X5 459 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 SNX20Q7Z614 316 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 PTAR1Q7Z6K3 402 aaPredicted RBP15.11■□□□□ 0.01
SNIP1-202ENST00000468040 HEATR4Q86WZ0 1026 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 PALM2Q8IXS6 379 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 PELI3Q8N2H9 469 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 OR4L1Q8NH43 312 aa15.11■□□□□ 0.01
SNIP1-202ENST00000468040 CEP76Q8TAP6 659 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms