RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 PKNOX2Q96KN3 472 aa11.05□□□□□ -0.64
PRPF3-203ENST00000467514 TMBIM4Q9HC24 238 aa11.05□□□□□ -0.64
PRPF3-203ENST00000467514 CASS4Q9NQ75 786 aa11.05□□□□□ -0.64
PRPF3-203ENST00000467514 RBM22Q9NW64 420 aaKnown RBP eCLIP11.05□□□□□ -0.64
PRPF3-203ENST00000467514 SATB2Q9UPW6 733 aa11.05□□□□□ -0.64
PRPF3-203ENST00000467514 EDDM13A0A1B0GTR0 161 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 F5H423 210 aaPredicted RBP11.04□□□□□ -0.64
PRPF3-203ENST00000467514 TRIM38O00635 465 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 PSMD3O43242 534 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 LUC7L3O95232 432 aaKnown RBP11.04□□□□□ -0.64
PRPF3-203ENST00000467514 ACSL3O95573 720 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 RHOCP08134 193 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 ADRA1AP35348 466 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 ETFBP38117 255 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 NNMTP40261 264 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 CSKP41240 450 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 ELK3P41970 407 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 DUSP3P51452 185 aaPredicted RBP11.04□□□□□ -0.64
PRPF3-203ENST00000467514 PPP2CBP62714 309 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 PPP2CAP67775 309 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 NIPAL4Q0D2K0 466 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 TTMPQ5BVD1 217 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 DNAJC21Q5F1R6 531 aaKnown RBP11.04□□□□□ -0.64
PRPF3-203ENST00000467514 TNFAIP8L3Q5GJ75 292 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 FSCBQ5H9T9 825 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 TMCO4Q5TGY1 634 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 KDELC1Q6UW63 502 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.04□□□□□ -0.64
PRPF3-203ENST00000467514 ATG14Q6ZNE5 492 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 ZBED8Q8IZ13 594 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 KRT222Q8N1A0 295 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 PGBD5Q8N414 524 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.04□□□□□ -0.64
PRPF3-203ENST00000467514 ATP11CQ8NB49 1132 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 FBXO36Q8NEA4 188 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 ARRDC2Q8TBH0 407 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 WFDC5Q8TCV5 224 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 IMP4Q96G21 291 aaKnown RBP11.04□□□□□ -0.64
PRPF3-203ENST00000467514 KLHDC7BQ96G42 594 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 MYOCQ99972 504 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 SLC25A51Q9H1U9 297 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 SYNDIG1Q9H7V2 258 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 SP110Q9HB58 689 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 SEPT3Q9UH03 358 aa11.04□□□□□ -0.64
PRPF3-203ENST00000467514 ARID1BQ8NFD5 2236 aaPredicted RBP11.03□□□□□ -0.64
PRPF3-203ENST00000467514 E7EVH7 732 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 K7ENP7 123 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 MUSKO15146 869 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 ANXA9O76027 345 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 DXOO77932 396 aaKnown RBP11.03□□□□□ -0.64
PRPF3-203ENST00000467514 CD160O95971 181 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 MMP2P08253 660 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 C5AR1P21730 350 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 MMP13P45452 471 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 SARNPP82979 210 aaKnown RBP11.03□□□□□ -0.64
PRPF3-203ENST00000467514 SRSF1Q07955 248 aaKnown RBP eCLIP11.03□□□□□ -0.64
PRPF3-203ENST00000467514 OVGP1Q12889 678 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 MTM1Q13496 603 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 SPARCL1Q14515 664 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 RFTN1Q14699 578 aaPredicted RBP11.03□□□□□ -0.64
PRPF3-203ENST00000467514 LBRQ14739 615 aaKnown RBP11.03□□□□□ -0.64
PRPF3-203ENST00000467514 SLC14A2Q15849 920 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 SETMARQ53H47 684 aaPredicted RBP11.03□□□□□ -0.64
PRPF3-203ENST00000467514 COLEC12Q5KU26 742 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 HP1BP3Q5SSJ5 553 aaPredicted RBP11.03□□□□□ -0.64
PRPF3-203ENST00000467514 CEP85LQ5SZL2 805 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 MARC1Q5VT66 337 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 STEAP4Q687X5 459 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 DENND5AQ6IQ26 1287 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 INO80CQ6PI98 192 aaPredicted RBP11.03□□□□□ -0.64
PRPF3-203ENST00000467514 ZNF574Q6ZN55 896 aaPredicted RBP11.03□□□□□ -0.64
PRPF3-203ENST00000467514 IQCHQ86VS3 1027 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 SPATS2Q86XZ4 545 aaKnown RBP11.03□□□□□ -0.64
PRPF3-203ENST00000467514 ANKMY2Q8IV38 441 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 STK40Q8N2I9 435 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 ARL14Q8N4G2 192 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 OR4C6Q8NH72 309 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 SPATA22Q8NHS9 363 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 FIBINQ8TAL6 211 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 UHMK1Q8TAS1 419 aaKnown RBP11.03□□□□□ -0.64
PRPF3-203ENST00000467514 PYROXD1Q8WU10 500 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 ZBTB9Q96C00 473 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 PGM2Q96G03 612 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 PPP1R2P1Q96PQ5 205 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 EBNA1BP2Q99848 306 aaKnown RBP11.03□□□□□ -0.64
PRPF3-203ENST00000467514 FEM1AQ9BSK4 669 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 ROPN1BQ9BZX4 212 aaPredicted RBP11.03□□□□□ -0.64
PRPF3-203ENST00000467514 LRRC40Q9H9A6 602 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 ROPN1Q9HAT0 212 aaPredicted RBP11.03□□□□□ -0.64
PRPF3-203ENST00000467514 ATP13A1Q9HD20 1204 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 EURLQ9NYK6 297 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 CHMP2BQ9UQN3 213 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 DMTF1Q9Y222 760 aa11.03□□□□□ -0.64
PRPF3-203ENST00000467514 DOPEY2Q9Y3R5 2298 aa11.02□□□□□ -0.64
PRPF3-203ENST00000467514 A0A087WUV0 522 aaPredicted RBP11.02□□□□□ -0.65
PRPF3-203ENST00000467514 CXorf51AA0A1B0GTR3 108 aa11.02□□□□□ -0.65
PRPF3-203ENST00000467514 NEMP2A6NFY4 417 aa11.02□□□□□ -0.65
PRPF3-203ENST00000467514 TTC34A8MYJ7 566 aa11.02□□□□□ -0.65
PRPF3-203ENST00000467514 GOLGA8KD6RF30 607 aa11.02□□□□□ -0.65
PRPF3-203ENST00000467514 GSTA2P09210 222 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms